Citrobacter youngae: CD187_19785
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Entry
CD187_19785 CDS
T05526
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cyo
Citrobacter youngae
Pathway
cyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CD187_19785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyo03019
]
CD187_19785
Enzymes [BR:
cyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CD187_19785
Messenger RNA biogenesis [BR:
cyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CD187_19785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
PhoR
Motif
Other DBs
NCBI-ProteinID:
AWV28315
LinkDB
All DBs
Position
4025659..4027077
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AA seq
472 aa
AA seq
DB search
MTLPRCTIFTRVANFCRKVLSREEREAELAVARPHMTVIPREQHSISRKDISENALKVMY
RLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHEGSESDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMQDLEEGIIRLIGNPETRYREDPVRMLRAVRFAAKLDMRISPETAEPIPR
LATLLNDIPPARLFEEALKLLQAGYGYETYKKLREYSLFQPLFPTITRYFTEDGDSPMER
IIAQVLKNTDNRIHNDMRVNPAFLFAAMFWYPLLEAAQKIAQESGLAYYDAFALAMNDVL
DEACRSLAIPKRLTSLTRDIWQLQLRMSRRQGKRAWKLMEHPKFRAAYDLLALRAEVEHN
AELQRLAKWWGEFQVSAPPEQKGMLNELDEEPDTRRRHRRPRKRAPRREGSA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgacactaccgaggtgcactatttttacccgagtcgctaatttttgccgcaaggtgcta
agccgcgaggagcgcgaggctgagctcgccgtcgcccgtccacatatgacggtaattccg
cgtgagcagcactctatctcccgcaaagatatcagtgaaaatgccctgaaggtaatgtac
aggctcaataaggccggatacgaggcatggctggttggcggtggtgtacgcgatcttttg
ctgggcaaaaagccgaaagattttgatgtcaccactaacgcaacgccggatcaggtgcgc
aaactgtttcgtaactgtcgcctggtcggtcgccgtttccgtctggcccatgtcatgttc
ggcccagaaattatcgaagtggcgacgttccgcggccatcatgaaggcagcgaatccgat
cgcacaacatcgcagcgtgggcaaaacggtatgctgctgcgtgacaacatcttcggctcc
atcgaagaagatgcacagcgtcgcgatttcacgattaacagcctgtattacagcgtggcc
gatttcaccgtacgtgattacgttgggggaatgcaggatctcgaagagggcatcattcgc
ctgatcggtaatccggaaacgcgctatcgcgaagatcctgtgcgcatgctgcgcgccgta
cgctttgccgccaagctcgacatgcgtatcagcccggaaaccgcagagccgatcccacgt
ctggctaccttgcttaacgatattcctcctgcacgcctgtttgaagaagcgctcaagctg
ttacaggcgggctatgggtacgaaacctataaaaaactgcgtgagtacagcctgttccaa
ccgctgttcccaaccattacgcgctacttcaccgaagacggtgacagcccgatggaacgc
atcattgcccaggtactgaagaataccgataaccgcattcacaatgatatgcgcgttaac
ccggcgttcttgtttgctgccatgttctggtatccgttactggaagccgcacagaaaatt
gcgcaagaaagcggtctggcctattacgatgctttcgcgctggcaatgaacgacgtgctg
gacgaagcctgccgctcgctggcgatcccgaaacgtttgacctcactgacccgcgatatc
tggcagttgcagttacgtatgtcccgtcgccagggcaaacgcgcctggaagctgatggag
catccaaagttccgcgcagcttacgacctgttagcgctgcgtgctgaagtcgaacacaac
gcggaattgcagcgactggcgaaatggtggggtgaattccaggtttctgcgccgccagaa
caaaaaggcatgctgaacgagctggatgaagagccagacacacgtcgtcgccatcgtcgc
ccgcgtaaacgcgcgccacgccgtgaaggctccgcatga
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