Citrobacter youngae: CD187_20460
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Entry
CD187_20460 CDS
T05526
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
cyo
Citrobacter youngae
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cyo03000
]
CD187_20460
Transcription factors [BR:
cyo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CD187_20460
BRITE hierarchy
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
RhopH3_C
EFG_III
Motif
Other DBs
NCBI-ProteinID:
AWV28443
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Position
complement(4178143..4179036)
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AA seq
297 aa
AA seq
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MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIKALEERLQGKLFKRKGRGLEP
SELGELVFRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADALSKQLVSSVLDAAVVEDE
QIHLRCFESTHEMLLDQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECSVSFWCTKPLPE
KPFPACLEERRLLIPGRRSMLGRKLLNWINSQGLNVEILGEFDDAALMKAFGATHNAIFV
APTLYSHNFYADDSIVEIGRVENVMEEYHAIFAERMIQHPAVQRICNADYSALFKPQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatataaattacaaccatctgtactacttttggcatgtctataaagaagggtca
gtggttggtgcagcagaagcgctttatctgacaccgcagaccattaccgggcagattaaa
gcgcttgaggaacgcttacagggaaaattgtttaagcggaaggggcgtgggctggagccc
agtgagttaggcgaattggtttttcgttacgcggataagatgttcaccttaagccaggaa
atgctggatatcgtgaactaccgcaaagagtctaatttgctgttcgatgtcggcgtggcg
gatgcgctatcgaagcagttggtcagcagcgtactggatgccgctgtggttgaagatgaa
caaatccatctgcgttgttttgagtcaacgcacgagatgctgttggatcaactcagccag
cataagctggatatgattatctccgactgtccgattgattctacgcagcaggaagggttg
ttctcagtgcggataggcgagtgcagcgtgagtttttggtgcaccaaaccgctgcctgaa
aaaccattcccggcctgccttgaggaacgtcggttgctgatccctggacgtcgttcgatg
ctcggacgtaagctgctgaactggatcaactcacaaggattgaatgtcgaaatcctcggc
gaatttgatgacgctgcgctgatgaaagcgtttggggcaacgcataatgctatttttgtt
gcacctactctgtattcgcacaatttctatgctgatgattctattgttgaaattggacgc
gtagaaaatgtgatggaagagtatcacgccatatttgcggaaagaatgatccagcatccg
gcggtgcagcgtatttgcaatgcggactactcggcattgttcaagccacagtag
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