Citrobacter youngae: CD187_22470
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Entry
CD187_22470 CDS
T05526
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
cyo
Citrobacter youngae
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cyo03000
]
CD187_22470
Transcription factors [BR:
cyo03000
]
Prokaryotic type
Other transcription factors
Others
CD187_22470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
MCM
AAA_22
NACHT
AAA_19
AAA_14
AAA_2
T2SSE
ATPase_2
AAA_7
GYF
AAA_33
ABC_tran
AAA_30
AAA_29
AAA_25
TsaE
AAA_17
AAA_10
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AWV28803
LinkDB
All DBs
Position
4599303..4600889
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AA seq
528 aa
AA seq
DB search
MKKRRVVIGVLGTVLDKRGKRANRFKKWRPTVGLCQQPDFPVDRLELLHQPRDEGMAQRL
IEDVALLSPDTEVRPHAVTINDPWDFEEVYAAFLDFATHYSFDTENEEYLVHITTGTHVA
QICWFLLTEARYLPASLLQTSPAPAGSSDEAVAAGVCSIIDLDLSRYATLTSRFQREQQQ
SVSFLKAGIDTRNATFNKLIDRIERVALRSTDPILLTGPTGAGKSFLAKRIFQLRQSRHL
VAGKLVAVNCATLRGDNAMSTLFGHVKGAFTGALTARSGLLREADGGVLFLDEIAELGLD
EQAMLLKAIEEKTFFPFGSDKEVQSDFQLIAGTHRDMQQWVAEGRFREDLYARINMWNFA
LPGLAQRREDIAPNVEYELHRFSSSKQMQVRFDKEARACYLAFACSPQAQWRGNFRELSS
SIARMATLAEQGRITLFLVEEEIALLKESWQITATQPELNMDIDLFDRRQLETVLEVCCR
SASLSEAGRELFAVSRQKKANPNDADRLRKYLARFGLSWESVRSDQIQ
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcggcgggttgtaattggcgtactgggtacggtgctggacaaacgcggtaaa
cgcgccaatcggtttaaaaagtggcgccccacggttggattgtgccaacagcctgatttc
cctgtcgacagactggaactgctccaccagccacgcgatgaaggcatggcgcaaaggttg
attgaagacgtcgcgctgctctcacctgacaccgaagtacgcccgcatgccgtgactatt
aacgacccctgggattttgaagaggtctacgccgcctttctcgacttcgccacccactac
agctttgatacagaaaacgaagagtatctggtgcacatcaccaccgggacgcacgtcgcg
cagatctgctggtttctgctaacggaagcccgctacctgcccgccagcctgctgcaaacc
agcccggcaccagccggttcatcggatgaggccgtcgccgccggcgtttgctcgataatc
gatctcgatttaagccgctacgccacgctcaccagtcgttttcagcgcgaacagcagcag
tcagtctcttttctgaaggccgggattgatacgcgcaacgccaccttcaataaactgatc
gatcgcattgagcgtgtggctctacgttcgaccgacccgatcctgctcaccggccccacc
ggcgcgggtaaatcctttctggcgaaacgtatttttcagctacgccagtcgcggcatctg
gtggcgggaaaactggtcgccgtcaactgcgcaaccctgcgtggcgacaacgcgatgtct
acattgttcggtcacgtgaaaggggcgtttactggcgcactcacggcgcgcagcggactg
ctgcgagaagcggatggcggcgtgctgtttctcgatgagatagccgaactggggttagac
gaacaggccatgctgctaaaagcgattgaagaaaaaacctttttcccgtttggctcggac
aaagaagtacagagcgattttcagctgattgccggaacccatcgtgatatgcagcaatgg
gtcgccgagggccgttttcgcgaagatctctacgcgcgtatcaatatgtggaacttcgcc
ctgcccggtctggcgcagcggcgggaagatatcgctccgaacgtcgagtatgagctacac
cgtttttccagcagtaaacagatgcaggtccgtttcgacaaagaggcacgtgcttgttat
ctggcatttgcctgctccccacaggcgcagtggcgcggcaattttcgcgagctaagttca
tccatcgcgcgaatggcgacgcttgccgaacagggacgcatcaccttattccttgtcgaa
gaagaaattgcgctgttaaaagagagttggcagattaccgctacgcaaccggaactgaac
atggacattgaccttttcgatcgccgccagttagaaacggtgctggaagtgtgttgccgc
agcgcgtcgctgtcggaagccggacgcgaactgtttgccgtctcacggcagaaaaaagcc
aatcctaacgatgcagaccgcttgcgaaaatatctcgcccgcttcgggctgagctgggaa
agcgttcgcagcgatcagatacaataa
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