Citrobacter youngae: CD187_23435
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Entry
CD187_23435 CDS
T05526
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cyo
Citrobacter youngae
Pathway
cyo03030
DNA replication
cyo03410
Base excision repair
cyo03420
Nucleotide excision repair
cyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CD187_23435
03410 Base excision repair
CD187_23435
03420 Nucleotide excision repair
CD187_23435
03440 Homologous recombination
CD187_23435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cyo03032
]
CD187_23435
03400 DNA repair and recombination proteins [BR:
cyo03400
]
CD187_23435
Enzymes [BR:
cyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CD187_23435
DNA replication proteins [BR:
cyo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CD187_23435
DNA repair and recombination proteins [BR:
cyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CD187_23435
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD187_23435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AWV28964
LinkDB
All DBs
Position
complement(4791136..4793922)
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKIGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAESDKIAGLTFRGAKTMAGKLEQNK
EVAYLSYQLATIKTDVELELTCEQLEVRQPAAEELLGLFKQYEFKRWVTDVEAGKWLQAK
GTKPAAKPQETIVVDETPEEPATVLSYENYVTILDEATLEEWIAKLKKAPVFAFDTETDS
LDNISANLVGLSFAIEPGVAAYVPVAHDYLDAPDQIARDRALELLKPLLEDENAHKVGQN
LKYDRGILANYGIELRGITFDTMLESYILNSVAGRHDMDSLSDRWLKHKTITFEEIAGKG
KNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPELQQHKGPLNVFENIDMPLVPVLSRV
ERNGVKIDPAVLHKHSEELTLRLNELEQKAHEIAGEAFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINKKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAPEDYLIVSADYSQIELRIMAHLSRD
KGLLTAFAEGKDIHRATAAEVFGLPLDSVTSEQRRSAKAINFGLIYGMSAFGLARQLNIP
RKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLEGRRLYLPDIKSSNGARRAGAE
RAAINAPMQGTAADIIKRAMIAVDGWLQTEQPRVRMIMQVHDELVFEVHKDDLESVSKKI
HQLMENETQIDVPLLVEVGSGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaacccacttatccttgtagatggctcatcttacctgtatcgc
gcataccacgcgttcccaccgctgactaacagcgcaggagaacctacgggcgcgatgtac
ggtgtcctcaacatgctgcgtagcttgattctgcaatatcaaccaacccatgcagcggtg
gtattcgacgccaagggtaaaaccttccgtgatgaattattcgaacattataagtctcac
cgcccaccgatgccggacgatctgcgtgcgcagattgaacctctgcatgcgatggtaaag
gcgatggggttgccactgttggctgtttctggcgtggaggcggacgatgttatcggtacg
ctggcgcgggaagcagagaagatcggtcgcccggtgctgattagcaccggtgataaagat
atggctcagttggtgacgccgaatatcaccctaatcaacaccatgaccaatacgatcctc
ggcccggaggaagtggtgaataagtacggcgtcccgccggaactgatcatcgatttcctg
gcgctgatgggggattcctcagataacattcctggcgttccaggcgtaggcgaaaaaacc
gctcaggcactactgcaggggctgggtgggctggataccctctatgccgaatcagacaaa
atagcggggttgaccttccgtggtgcgaaaaccatggcaggcaaacttgagcagaacaaa
gaggtggcgtacctctcttatcaattggctaccatcaaaacggatgttgagctggaattg
acctgtgagcagctggaagtccgtcagcccgctgcagaagaactgcttggcctgtttaaa
cagtatgaatttaaacgttgggttaccgacgttgaagcgggtaaatggctacaggcgaaa
gggacgaagccggcggcaaaaccgcaagaaactattgtcgtcgatgaaacgcctgaggag
ccggccacggttctttcgtatgaaaactatgtgacgattctggacgaagcgacgctggaa
gagtggatcgctaagctgaaaaaagcaccagtctttgccttcgatactgaaactgacagc
ctggacaacatttccgcgaatctggttggcctgtcttttgccattgaaccgggtgtggcg
gcgtatgttcctgttgcccacgattacctggatgcccctgaccagatcgcgcgcgaccgc
gcgctggagctgctgaagccgctgctggaagatgagaacgcgcacaaagtcgggcaaaac
ctgaagtacgatcgcggcatcctggcgaactatggcatcgagctgcgcggcatcaccttt
gacaccatgctcgaatcctacattcttaacagcgtcgctggacgacacgatatggacagc
ctgtcggaccgctggctgaaacataaaaccatcacctttgaagagatcgccggaaaaggc
aaaaaccagctgacctttaaccagatagcactggaagaggctggtcgttacgctgcggaa
gacgccgacgttacgctacagctgcatctgaagatgtggccagaattgcagcagcataaa
gggccgttgaacgtctttgaaaatatcgatatgccgctggtgccggttttgtctcgcgtt
gagcgcaacggtgtgaaaatcgatccggctgttctgcacaagcattcagaagagctgacg
ctgcgtttgaatgagctggagcaaaaagcgcacgagatcgccggagaagcgtttaacctc
tcttccactaagcaactgcaaactatcctgtttgaaaagcagggtattaagccgttgaag
aaaacccctggcggcgcgccatcaacgtcggaagaggtactggaagagctcgcgctggat
tacccattgccgaaagtgatcctggaatatcgtggtttagcaaaactgaagtcgacctat
acggataagcttccgttgatgattaacaagaaaaccgggcgcgtgcacacctcctaccat
caggcggttactgccaccgggcgcttgtcttcaacggatccaaacctgcaaaacatcccg
gtacgtaatgatgaaggtcgtcgtattcgtcaggcgttcattgcgccagaagactacctg
attgtctctgcggactactcacagattgaactgcgtatcatggcgcacctttcacgtgat
aaaggtctgcttaccgcgtttgccgaagggaaagacattcaccgcgcaacggcggcagaa
gtctttggtttaccgcttgattctgtgaccagcgagcaacgccgcagcgctaaagccatt
aacttcggtttgatctacgggatgagcgcctttggtttggcgcgccagttgaatattccg
cgcaaagaagcacagaagtacatggatctctactttgaacgctaccctggtgtgttggaa
tacatggaacgcacccgcgctcaggcgaaagagcaaggctatgtagaaacgctggaaggt
cgccgtctctatttaccggatattaaatccagtaatggtgctcgtcgcgctggtgctgaa
cgtgcggccattaacgccccgatgcagggaactgctgcagacattatcaaacgagccatg
attgccgtggatggatggctgcaaaccgagcaaccgcgcgtgcgcatgatcatgcaggta
cacgatgaactggtgtttgaagtgcacaaagatgatctggaaagcgtctccaaaaagatc
caccaactgatggaaaacgagactcagattgacgtgccgttgctagtggaagtcgggagt
ggtgaaaactgggatcaggcgcactaa
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