Citrobacter youngae: CD187_23670
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Entry
CD187_23670 CDS
T05526
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cyo
Citrobacter youngae
Pathway
cyo03420
Nucleotide excision repair
cyo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CD187_23670
03430 Mismatch repair
CD187_23670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyo03400
]
CD187_23670
Enzymes [BR:
cyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CD187_23670
DNA repair and recombination proteins [BR:
cyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD187_23670
MMR (mismatch excision repair)
Other MMR factors
CD187_23670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AWV29006
LinkDB
All DBs
Position
complement(4840607..4842769)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLTVENNSPYSIMAV
TFTNKAAAEMRHRIGQIMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWFINSQKDEGLRPHHLQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLTDFPGAETIRLEQNYRSTNNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLDELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRATVSRPVSHQRMG
TPMAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgataaacagcgtgaagcggtggccgcg
ccacgcagcaacatgctggttctggcaggcgcggggagtggtaaaacgcgcgtgctggtg
catcgtatcgcctggttactgacggttgagaacaactcgccgtactccattatggcggtg
acctttaccaacaaagcggcggcggaaatgcgccaccgtatcggccagatcatgggaacc
agccagggcggtatgtgggtcggtacattccacggtctggcccaccgtctgctgcgcgcg
caccatatggatgcgaacctgccgcaggattttcagatcctcgacagtgaagaccaactg
cgtttgctcaagcgtctgatcaaggcgatgaaccttgatgagaagcagtggccgccgcgt
caggcgatgtggttcatcaacagccagaaagacgaagggctgcgtccgcatcatctgcaa
agctacggcaacccggttgagcaaacctggcagaaagtgtatcaggcttaccaggaagcg
tgtgaccgcgcggggctggtggatttcgccgagctgctgctgcgcgcccacgagctgtgg
ctcaacaaaccgcatatcctgcagcactaccgcgaacgttttaccaatatcctggtggac
gaatttcaggataccaacaacattcagtacgcgtggatccgcctgctggcgggcgatacc
ggcaaggtaatgatcgtcggcgatgacgatcagtcaatctacggctggcgcggagcgcag
gtggagaacatccagcgcttcctcacggatttccccggcgcagaaactattcgcctggag
cagaactaccgctcgactaacaatatcctcagcgcggccaacgccctgattgaaaacaac
aacgggcgtctgggtaaaaagctgtggaccgatggcgtcgacggcgaaccgatctcgctg
tactgcgcgttcaacgaactcgatgaagcgcgctttgtggtcaatcgtatcaagacctgg
caggacaacggtggtgcgctggagcaatgcgctattctttatcgcagcaacgcccagtcg
cgcgtactggaagaggcgttgttacaggccagcatgccgtatcggatttatggcgggatg
cgtttcttcgaacgccaggaaatcaaagatgcgctctcttacctgcgcctgatcgccaac
cgcaatgacgacgccgcatttgaacgtgtggtgaatacgcccacccgcgggattggcgat
cgtactttagatgtggtgcgtcagacctcccgtgaccgccagctaacgttgtggcaggcc
tgtcgtgagctgttgcaggaaaaagccctcgcgggtcgcgccgccagtgccttacagcgc
tttatggagctgattgacgcactggcgcaggagaccgccgatatgccgctgcacgtgcag
actgaccgggtgattaaagactccggcctgcgcatgatgtacgagcaggaaaaaggtgag
aaaggccagacgcgtatcgaaaacttagacgaactggtgacggcaacgcgccagttcagc
tacaacgaagaagacgaagacttaatgccgctgcaggcgttcctgtctcacgctgcgctg
gaagcgggcgaagggcaggcggatacctggcaggacgcggtacagttgatgacgctgcac
tcggcgaaaggtctggagttcccgcaggtgtttatcgtcgggatggaagaaggtatgttc
cccagccagatgtcgctggacgaaggtggtcgcctcgaagaagagcgccgcctggcttac
gtaggcgtgacccgtgcaatgcaaaagctgacgctgacctacgccgaaacgcgtcgtctg
tacggcaaagaggtttaccatcgtccgtcgcgctttatcggcgaactgccggaagcgtgc
gttgaagaggttcgcctgcgcgccactgtcagccgcccggtgagccatcagcggatgggc
acgccaatggcggaaaatgataccggctataagcttggccagcgcgtgcgccacgctaaa
tttggcgaaggcaccatcgtcaacctggaaggaagcggcgaacacagtcgtttgcaggtc
gcattccaggggcaggggatcaaatggctggttgccgcctacgccagactggaaacggta
tga
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