Rippkaea orientalis PCC 8801: PCC8801_0132
Help
Entry
PCC8801_0132 CDS
T00806
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cyp
Rippkaea orientalis PCC 8801
Pathway
cyp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCC8801_0132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyp03400
]
PCC8801_0132
Enzymes [BR:
cyp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PCC8801_0132
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PCC8801_0132
DNA repair and recombination proteins [BR:
cyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PCC8801_0132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Zn_ribbon_6
RNHCP
Motif
Other DBs
NCBI-ProteinID:
ACK64238
UniProt:
B7K1T1
LinkDB
All DBs
Position
135746..136594
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVETVCRGLNELTSGKVIKDAEVLLPRSLASPSSVDEFLSNIRGVIFGEWQRRGK
YLLGTLVKESGEAAGWLGVHLRMTGQLLWVNQSEPLQIHTRLRLFCGENKELRFVDIRTF
GKVWCVPPKTTPETIITGLKKLGVEPFSDDFSDDYFTTKLNGRQRNIKTLLLDQEIVAGL
GNIYADEALFKSGVHPTTLGKNLKPQQIEQLRIAIIEVLETAIEKGGTTFSDFKGVTGIN
GNYGGTAWVYGRTGEPCRVCGTSIERLKLGGRSAHFCPRCQA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaacttcctgaagtagaaacggtgtgtcgaggtcttaatgagttgacttcaggt
aaagtcattaaagatgcagaagttttattacctcgtagtcttgcttctccttcttcagtt
gatgaatttttaagcaatattcggggtgttatttttggtgagtggcaacgacggggtaaa
tatttattaggaacactggtaaaagagtctggagaagccgcaggatggttaggggttcat
ctacgcatgacgggtcaattattatgggtaaatcaatctgaaccgctacaaattcatacc
cggttgcgtcttttttgtggtgagaataaagagttacggtttgtggatattcgcaccttt
ggtaaggtctggtgcgttcctcctaaaacaactccagaaacgattattacagggttaaaa
aagttgggggttgagcctttttctgatgatttttctgatgattattttacgacaaaatta
aacggtcgtcaacgcaatattaaaaccttgttacttgatcaggaaattgtggccgggtta
ggcaatatttacgccgatgaagcgttatttaaaagcggtgttcatccgacgactttagga
aagaatttaaaacctcaacaaattgaacagttacgaatagctattattgaagtattagaa
acagctattgaaaaaggaggaacaacctttagtgattttaaaggagtaacgggaattaat
ggtaattatgggggaactgcttgggtttatggtcgcacgggagaaccttgtcgggtttgt
ggtacgtctattgaacgcttaaaattagggggacgttcggctcatttttgtccccgatgt
caagcttaa
DBGET
integrated database retrieval system
