KEGG   Rippkaea orientalis PCC 8801: PCC8801_0215
Entry
PCC8801_0215      CDS       T00806                                 
Name
(GenBank) putative transcription regulator with HTH domain
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
cyp  Rippkaea orientalis PCC 8801
Brite
KEGG Orthology (KO) [BR:cyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cyp03000]
    PCC8801_0215
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cyp02048]
    PCC8801_0215
Transcription factors [BR:cyp03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    PCC8801_0215
Prokaryotic defense system [BR:cyp02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    PCC8801_0215
SSDB
Motif
Pfam: Telomere_reg-2 HTH_3 FANCI_S4 HEPN
Other DBs
NCBI-ProteinID: ACK64318
UniProt: B7K211
LinkDB
Position
210116..210556
AA seq 146 aa
MTLTLNKKNYLKLLEKTQIIPKIIDTQEEYEQYLAVAENLIAKKDNRTPEETALFRLLVR
LIEDYEENIYSLEDFTNLSAHEILQHLLEYSNTTPEDLSNIINCSQELILALINGEQTIN
QQQAKLLGMYFKVDPSLFIEIIGSKT
NT seq 441 nt   +upstreamnt  +downstreamnt
atgacccttactttaaataaaaaaaattacctaaaactgctagaaaaaactcaaattatc
cccaaaataattgacacgcaagaagaatatgaacaatatttagcagtagcagaaaacctg
attgccaaaaaagataaccgtactccagaagaaacagctttatttcgcttattggttaga
ttaatagaagattatgaagaaaacatctattctttagaagattttaccaatctttcagcg
catgaaattttacaacaccttttagaatatagtaatactaccccagaagatctaagcaac
attataaactgttctcaagagttaattttagcgttgattaatggagaacaaacaattaat
caacaacaagctaaactgctaggaatgtattttaaagttgaccctagtttatttatcgag
ataatagggtcaaaaacctag

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