Rippkaea orientalis PCC 8801: PCC8801_0956
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Entry
PCC8801_0956 CDS
T00806
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
cyp
Rippkaea orientalis PCC 8801
Brite
KEGG Orthology (KO) [BR:
cyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cyp03032
]
PCC8801_0956
03036 Chromosome and associated proteins [BR:
cyp03036
]
PCC8801_0956
03400 DNA repair and recombination proteins [BR:
cyp03400
]
PCC8801_0956
DNA replication proteins [BR:
cyp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PCC8801_0956
Chromosome and associated proteins [BR:
cyp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PCC8801_0956
DNA repair and recombination proteins [BR:
cyp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PCC8801_0956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
SnoaL
HU-CCDC81_bac_2
HU-CCDC81_euk_1
A_thal_3526
Motif
Other DBs
NCBI-ProteinID:
ACK65033
UniProt:
B7JZU0
LinkDB
All DBs
Position
1008826..1009122
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AA seq
98 aa
AA seq
DB search
MNKEDLVNMIAAKTRITKKDTSQILDALTETIMETVASGEKVVLVGFGTFEPRDRKERKG
MNPQTGQPITIPATTVPAFSAGKVFKEQVVNKGKEDAS
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagaagatctcgtcaacatgattgccgctaagactcgtattaccaaaaaagat
acgagtcaaattctcgatgctctcacagaaaccattatggagactgtcgcttcaggggaa
aaagttgtcttagttggtttcggaacttttgaaccgagagaccgcaaagaacgcaaagga
atgaacccccagacaggacaacccattactatccctgcgacaactgtccctgctttctct
gcggggaaagtcttcaaagaacaggtagtcaacaaagggaaagaagacgcttcttag
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