Rippkaea orientalis PCC 8801: PCC8801_1286
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Entry
PCC8801_1286 CDS
T00806
Name
(GenBank) DSH domain protein
Organism
cyp
Rippkaea orientalis PCC 8801
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Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_cyano_M
DEAD
ResIII
Helicase_C
DEXQc_Suv3
nSTAND3
ATPase_2
ADAMTSL1
nSTAND_NTPase5
IstB_IS21
AAA_30
AAA_19
DUF3516
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACK65351
UniProt:
B7K3K9
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All DBs
Position
1335768..1338671
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AA seq
967 aa
AA seq
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MNQPLAQSQLNLATLFPFELDGFQKDAIAALARGKSVVICAPTGSGKTVIGEYAIYHALE
QGKRVFYTTPLKALSNQKFRDFQDKFSQTEDNSLVGLITGDTVINANAAIVIMTTEIFRN
MLYETPIGQVGTSLENVATVILDECHYISDRGRGTVWEESIIYCPPNIQLVALSATIGNP
EQLTDWINQVRLTAPGVDPKSDAVSLCELINSDFRPVPLRFFFSTKKGLAPLLNPKQTAL
NPRLKFKGNPNKKRRLKREDCPSLLTVIKQLEKQDLLPAIYVIFSRRGCDQSVQRLEGIT
LVNPEEAHALQYNLLTFFLAENPRLQESLLEAVKTENPPLYQPLLDFLSSPIPDADLFDY
LARDQETKLHLFQLLATTSQLVRSDQLEPLTRGIAVHHAGILPVWKELVEQLFEAGLVKV
VFATATLSAGINMPARTTVISALSKRTDTGHGMLTPSEFLQIAGRAGRRGMDEVGYVVTV
QTPFEGAQEAAFLATAGSEPLKSCFTPSYGMVLNLLQKHTLNEAKHLLERSFAEYLAKLK
IEPEQQAIAALTTELTQLDMALAGLSESELFGYEKLKARLKEEQRLLKLLEEQAEETRKQ
QILPLLAKLNTGDLLYLKGKHLKVATPQLAVLVGMVPGSGQVPDFLCLGEDNRWYLVKRA
DIVEINSASLPRESLQSLNLPDLEACRLGKGPKGDETSRQICQQMGDRAVSLKIAPEVMA
QQQRLDEIQRTLEQHPLENRKNPARLLKLHHQRLRLREQLHISQVRFQKLQSSQSYYWEE
FLNLIEILREFEALEGYHPTPLGQACATIRAENELWLGLVMMSGALERLESPQLAAAVSA
LITESLRPDTWTNYLPSPEIIALFTESHPQGVSLQEIRRLLYQTQSRYHITIPVWLELDL
IGMIEQWALGADWQELCENTSLDEGDVVRLLRRTIDLLWQIPQIPAVSDYLKDTAKEAVT
RLKRFPL
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcaacccttagcccagtctcaattaaatttagctactctgtttccctttgaactc
gatggattccaaaaagacgcgatcgcagccctagccagaggaaaatccgtagtcatctgt
gcccccacggggtcaggaaagaccgtcattggagaatatgccatttatcatgccttagaa
cagggtaagcgtgtcttctataccactcccctcaaagccctttctaatcaaaaattccgc
gactttcaggataaatttagtcaaacagaagataacagcctagtcgggttaatcacaggg
gacacggtaattaatgccaacgctgccattgtgattatgaccacggaaatcttccgaaat
atgctctacgaaacccccattggtcaggtgggaacctccctagagaacgtagccacggtt
atcttagatgaatgtcattatatcagcgatcgcggtcggggaacggtttgggaagagtcg
attatttactgtccccccaatattcaattagtcgccctttctgccaccatcggcaacccc
gaacaactcaccgactggattaaccaagttcgcttaactgcccctggagttgacccaaaa
tccgatgctgtaagtctttgtgagttaattaattccgattttcgacccgtcccgcttcgt
ttcttttttagtaccaaaaaaggactagcccccctactcaatcccaaacaaacagccctt
aaccctcggcttaaatttaaaggaaatcctaacaaaaaacgccgactcaaacgggaagac
tgtccgagtttattaacagtcattaaacaattagaaaaacaagatttattgcccgctatt
tatgtgatttttagccgtcgcggctgcgatcaatcagtacaacgacttgaagggatcacc
ctagtcaacccagaagaagcccatgccctacaatacaatttattaacctttttcttagcg
gaaaatccccggttacaagaaagtctgctggaggctgtaaaaaccgaaaatcctccctta
tatcaaccccttttagactttttatccagtcctatccctgatgctgatttatttgattat
ttagccagagatcaagaaacaaaacttcatttatttcaattattagccaccacttcccaa
ttagtcagaagtgatcaattagaacctctcaccagaggcattgccgtccaccatgcaggg
attcttcccgtttggaaagaattggtcgaacaactctttgaagccggattagtcaaagtc
gtctttgccaccgctaccctatcggccggcattaatatgccagcgcggacgacggttatt
tctgccttgtctaaacgtaccgataccggacacgggatgttaacgccctcggagttccta
caaatcgctggacgcgctggaagacgagggatggatgaagtgggttatgtggtgacagtt
caaaccccctttgaaggagcccaagaagctgctttcttagcaacagccgggtcagaaccc
ttaaaaagctgttttaccccttcctacgggatggtgttgaatttattacaaaaacatact
ttaaatgaggcaaaacacttattagagcgcagttttgccgaatatctggcaaaactgaag
atcgaacctgaacaacaagcgatcgcagccttaaccacggaactgacccaactcgatatg
gctttagcaggactctccgaaagcgaactgtttggctatgagaaactaaaagcccgcctt
aaggaggaacagcgattgctgaaactgcttgaagaacaggcagaagaaaccagaaaacag
caaattttacccctattagccaagctcaatacaggagatcttttgtatttaaagggaaaa
cacctaaaagtcgctacccctcaattagcggttttggtggggatggttccgggttcgggt
caggttcctgattttctgtgtttaggagaagataatcggtggtatttggtcaaaagagcc
gatatcgtcgaaataaattcggcttcgttgccgcgtgagagtcttcagtccttaaatttg
ccggatctcgaagcgtgtcgtttgggtaaaggtccaaaaggcgatgaaacgtcaaggcaa
atttgtcaacaaatgggcgatcgcgctgtttccctaaaaattgcccctgaagtcatggca
caacagcagcgtttagacgaaattcaacgaaccctagagcagcatcctctagaaaaccgc
aaaaatccagcccgattattgaaattacaccatcaaagactgagattgcgcgaacaactc
catattagtcaggttcgttttcaaaagcttcagtcaagtcaatcctattattgggaagaa
tttctcaatttaatcgaaattttacgggaatttgaagctttagagggctatcatcctact
ccccttggccaagcttgtgcaacgattcgcgccgaaaatgaactctggttaggattagta
atgatgtcgggtgctttggaacggttagagtctccccaactcgcggccgcggtgagtgcc
ttaattaccgaaagtctgcggcctgatacttggacaaattatctcccttccccagaaatt
atcgcgttatttacggaaagtcacccccaaggagtgagtttacaagaaattcgccgcctt
ctctatcaaactcaatctcgctatcatatcaccattcccgtttggttagaattggatttg
attggtatgatcgagcaatgggctttaggggcagattggcaggaattatgcgagaatacc
agtctcgatgagggagatgtcgtgcggttgttaagaagaacaattgatctcctctggcaa
attccccaaatacccgcagtttctgattatttaaaagacactgccaaagaggcagtgact
cggttaaaacggtttccgctataa
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