Rippkaea orientalis PCC 8801: PCC8801_1360
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Entry
PCC8801_1360 CDS
T00806
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cyp
Rippkaea orientalis PCC 8801
Brite
KEGG Orthology (KO) [BR:
cyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cyp03032
]
PCC8801_1360
03400 DNA repair and recombination proteins [BR:
cyp03400
]
PCC8801_1360
Enzymes [BR:
cyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PCC8801_1360
DNA replication proteins [BR:
cyp03032
]
Prokaryotic type
DNA Topoisomerases
PCC8801_1360
DNA repair and recombination proteins [BR:
cyp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PCC8801_1360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Striatin
TMF_TATA_bd
FmiP_Thoc5
Sec2p
KxDL
Motif
Other DBs
NCBI-ProteinID:
ACK65421
UniProt:
B7K4F6
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All DBs
Position
complement(1421719..1424226)
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AA seq
835 aa
AA seq
DB search
MTRQLNLLATGQIIPTALHTEMKRSYLEYAMSVIVGRALPDVRDGLKPVHRRILYAMYEL
GLTPDRPFRKCARVVGDVLGKYHPHGDQAVYDALVRLVQDFSSRYPLLAGHGNFGSVDND
PPAAMRYTETRLASIADTGMLRDISEAIVDFTNNFDNSQQEPVVLPAQLPILLLNGCTGI
AVGMATNIPPHNLGEIVDGLVALIDDPELSDEKLWQLIPGPDFPTGGEIITQEGIREAYA
TGRGIIPVRGITRIETLDVGRKRRRERTAIVVTELPYQVNKAAWIEKMADLVNQGRLEGI
ADIRDESDRTGMRVVIELKRDAKANTVLKSLYKQTALQSNFGAILLALVDNKPCQLSLRR
LLEEFLRFREQTLTRQYTHELEEAQSRLHLLAGLLIALNNLDAIIDILRNAADGTTAKMR
FQAELGISDAQANAILAMPMRRLTGLERQKLQSEHSELQTRIEELQTLLSDRHELLKTLK
KDLRSLKRKFGDPRRTRIVQPPKTPKSSSTPNVKKEEPPTTLSPKTEESPRKTPSLTLFT
PQPPPENAILEINHQGEASWRLPDGQGQDSPIFRAIIGQKSELMVITDAGKAYPVAVAEI
PPLTLQAIPLLSLLPKGAQRDANRVIDAGFVPNDPHGYDLLLLTQQGRIKRVKMSELSDL
TNRGLVLIKLKEGDRLGFVCPTQEGQEVAIAISGGRILRYPVTDEVIPLMGRSAQGNQAL
KLRNVGETVVNCLTLHSQGEVLLISSLGYGKRLSLTELRLGKLGDLGTQCLQFTQKTDKL
AGMIAAKENGQVRCLTNQNRSLAISVETILPWGKDGPGDRLVKLQPEEVITTVLG
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacaagacagctaaacttattagcgactggtcaaattattcccacggctttgcatacc
gagatgaagcgttcttatcttgagtatgccatgagtgtgattgttgggcgtgcccttcct
gatgtccgcgacggactcaaacccgtacaccgacgcattctctatgctatgtatgaattg
ggattaacccccgatcgcccctttcgtaagtgtgctagggtagtaggggatgtcttgggg
aaatatcatccccacggcgatcaggcggtctatgatgccttagttcgtcttgtacaggat
ttttcgagtcgttatccccttttggcgggtcacgggaactttgggtcagtggataatgat
cctccggcggcgatgcgttacacggaaacccgactagcctccattgcggatacggggatg
ctacgggatatcagcgaggctattgttgattttactaataattttgataattctcaacaa
gaacccgtcgttttaccggcccaattgccgattttactgctgaatggttgcaccgggatt
gcggtggggatggcgacgaatattccgccccataatttaggggaaattgtcgatgggtta
gtggcgttaattgatgatcctgaactctctgatgaaaagctgtggcaattgattccaggt
ccagattttcccaccggaggcgaaattatcactcaagaggggattcgggaagcttacgcg
acgggacgggggattatcccagtccgggggatcactcgcattgaaaccttggatgtggga
cgaaaacgtcgacgggaacggacggcgattgtggtcacggagttgccctatcaggtgaat
aaggcagcttggattgaaaaaatggcggatttggtcaatcaagggcgtttagaagggatt
gcggatattcgggatgaaagcgatcgcacaggaatgcgggtggtgattgaattaaaacgc
gatgccaaagccaatactgtcctcaagtctctctataaacaaacggctttacaaagcaat
tttggggcaattcttctggctttggtggataataaaccgtgtcagctttcgttacgccga
ttattagaggaatttttacgtttccgagaacagaccctcactcgtcagtacacccatgag
ttggaagaggcgcaaagtcgcttgcatctgttggcggggttgttaattgccctgaataat
cttgatgcgatcattgatattttacgcaatgcagccgatggaacgacggcaaaaatgaga
tttcaggcggaattaggcattagtgatgcccaagctaacgctatcttagcgatgccgatg
cgccgtttgacgggcttggaacgacaaaaattacagtcggaacattcggagttacaaacc
cggattgaggaattgcaaaccctgttaagcgatcgccatgaactgttaaaaacgcttaaa
aaagacctgcgatcgctaaaacgtaaattcggtgatccccgtcgtactcgtatcgttcaa
cccccgaaaacacctaagtcctcatcaacgcctaatgttaaaaaagaggaacctcctaca
acactttcccctaaaactgaggaatctccccgaaaaaccccctctttaaccctgtttact
ccccaaccgccgccagagaatgccatcctagaaattaatcatcaaggagaggcttcttgg
cgattaccggatggtcagggacaagattctccgatttttcgggcaattattggacaaaaa
agcgaattaatggtgattactgacgcggggaaagcctatcccgtcgccgtcgcggaaatc
cccccgttaacccttcaagccattcccctgttgagtttattaccaaaaggagcgcaaaga
gacgcaaatcgggtaattgatgcgggttttgtgccgaatgatccccatgggtatgattta
ctcttgttgacgcaacaagggcgcattaaacgggtgaaaatgtccgaattgagtgatcta
accaatcgaggactggtcttaattaagctaaaggagggcgatcgcctagggttcgtttgt
cccacccaagaaggtcaagaagtggcgatcgccatctcaggagggcgaattttgcggtat
cccgtcacggatgaggtgatccccctaatgggtcgcagtgcccagggaaatcaagcgtta
aaactgcgcaatgtaggagaaacggtggtcaattgcctgacgcttcattcccaaggggag
gttttattaatttctagtctgggttatggaaaacggttgtccttaacggaactcaggtta
gggaaattaggggatcttggtactcaatgtctacaatttacccaaaaaaccgataaatta
gcgggaatgattgctgcgaaagagaatggccaagttagatgcctaacgaatcagaatcgg
tctttggccatttctgttgagacgatccttccttggggtaaggatggacccggagatagg
ttagttaaactccaaccagaggaagtcattaccacggtattaggctaa
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