Rippkaea orientalis PCC 8801: PCC8801_4158
Help
Entry
PCC8801_4158 CDS
T00806
Name
(GenBank) alpha amylase catalytic region
Organism
cyp
Rippkaea orientalis PCC 8801
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CHB_HEX_C_1
CBM26
Fn3_assoc
Bac_A_amyl_C
Motif
Other DBs
NCBI-ProteinID:
ACK68090
UniProt:
B7K637
LinkDB
All DBs
Position
complement(4359146..4361782)
Genome browser
AA seq
878 aa
AA seq
DB search
MPDLVVHFKKPKGWQNTINIHYWDTHPVSRATQWPGVPMTEEDHDWFVYRFEAIEGANIV
FNDSRGQQTQNLKREKEGWFFENNTWYDQNPEGPTIPVIIARPKGGTYLSTQQIFLESSN
RDDIIYFTLDGTQPTTASQRYSNPITIDQTATLLTFGVNSQGETGTLESFIYTIDPNADL
EPPTITANFDSNTYNKPILVVFTVSDNHAKPVTAYYTTDGTEPTPQSEVYVQGNAMNGLM
GKQFSIQESTQIRFLVIDGAGNETHATFYYNIQKGTKSTDFREETIYFLLPTRFYDGDPS
NNFFCRDRIKFNRETGEPEDPHWRGDFKGLIEKLDYIKELGFTAIWITPPIENRSGLDYH
GYHGYDWTKIDPRLESPDATYQDLIDEIHARGMKIIQDVVVNHSSQYGIRGKVWIDHLPI
KYYVPQGSQQGQINYGPYQGNFGNYTHPFREDNDNPVAPEWFRERQNSDPEGIVPLVDPL
TGETVPKPGYNPNRFFGIDANTLDPQWYHQDGFMAGGDWESASIQTKHMAGDTIDLYTEK
QNVKDYLINAICRYLDMGVDALRLDTVKHVERGNLLEYINAWKAYKPGLFVFGENLVKGS
GWGDLFGDDNAPSFIRPWWYTRLGNDVRDPNSGGDSGFSVLDFSLFSTFRDNVSRGSYSG
IGGILSRDWVYGDATTLVTFLQNHDVGPDNDFRFRFRGDQWMAAATYNMLWTIRGIPCLY
YGEEIEFMKGAPQDIIGNDDTLDQTGRAYFGDYLTDEAIGTTQSHPLYQHIKRLNLIRRS
IPALQKAPMSQVNEWGSGMSFIRDYNNGESYAVVGLAMGGQQTITVSNVRNGNYVDAVTG
HTINVSGGSLSFSVQGNSAGIYVLNGFGKIGDDGVYLR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatctcgttgtccattttaaaaagcccaagggatggcaaaataccatcaatatt
cattattgggatactcaccccgtttcccgtgccactcaatggccgggagttcccatgaca
gaagaagatcatgactggtttgtctatcgttttgaggcaatagagggagcaaacatcgtt
tttaatgatagcagaggacaacagacacaaaacctgaaaagagagaaagaaggctggttt
tttgagaataacacttggtacgatcaaaacccagaaggtccgactatccctgttattatt
gctcgtcccaaaggcggaacctacctcagcacacaacaaatttttctagaaagtagtaac
cgtgacgatatcatctattttaccctcgatggaactcaaccaactacagcatcccaacgc
tacagcaatcctattactatcgatcaaacagcgactttgttaacctttggggttaattcc
caaggagaaaccggaactctcgaatcgtttatttataccatagatcccaacgcagactta
gaaccgccgaccattactgctaatttcgactcaaatacctacaacaagccgattttagtt
gtttttaccgtcagcgacaaccatgccaaacccgtgaccgcttactataccaccgacgga
acagaacccacaccacaatctgaggtttatgtccaaggtaacgctatgaatgggttaatg
ggtaagcaatttagtatccaagaaagtacccaaattcgctttctagttattgatggtgca
gggaatgaaacccatgcaactttttactacaatattcaaaaaggaacaaaatcgaccgat
ttccgcgaagaaaccatttactttttgttacccactcgcttttatgatggtgatcccagt
aataactttttttgccgcgatcgcatcaagtttaaccgcgaaaccggagaaccggaagat
ccccattggcgcggagatttcaaaggattaatcgaaaaactcgactatatcaaagaatta
ggctttaccgccatttggatcacccccccgatcgaaaaccgtagcggactcgactaccat
ggctatcatggctatgattggacaaaaattgacccccgactggaatctcccgatgctacc
tatcaagatttaatcgacgaaattcacgccagagggatgaaaatcatccaagatgtggtg
gttaaccattcttcccaatacggcattcgggggaaagtttggatcgatcatttaccgatc
aaatattatgtcccccaaggatcacagcaggggcaaattaattatggtccctatcaaggg
aattttggcaattacacccatcctttccgcgaagataacgataaccctgtcgcgccggaa
tggttccgagaacggcaaaattctgaccctgaaggcatcgttcccttagttgatccttta
acgggagaaactgttcctaaaccggggtataatcctaatcgcttttttggcatcgatgca
aataccctcgatccccaatggtatcatcaagacggctttatggcgggaggagactgggaa
agtgcctccattcaaacaaaacacatggccggggatactattgatctttacacagaaaaa
cagaacgtcaaagattatctgattaacgcgatttgccgttatttagatatgggggtagat
gccttacgactcgataccgtgaagcacgttgaacgggggaatcttctggaatatattaat
gcttggaaagcctataaacccggtttatttgtgtttggtgaaaatttagtcaaagggagt
ggttggggtgatttatttggtgatgataacgccccctcgtttattcgtccctggtggtat
actcgattaggaaatgatgtcagagatcccaattcaggcggagattccgggttttcggtg
ttagatttttccctattttccacctttcgagataatgttagcaggggaagttatagtggc
attggtgggattttatcgagagattgggtatacggggatgcaacaacattagtcaccttt
ttacaaaaccacgatgttggacccgataatgattttcgcttccgttttcggggtgatcaa
tggatggcggcggcaacctacaatatgctatggacaattcgggggattccttgtctgtat
tatggggaagaaatcgaatttatgaaaggtgccccccaagatattatcggcaatgatgat
acgttagatcaaacaggacgggcttattttggggattatttaaccgatgaagcgatcggg
acaacccaaagtcatcccctctatcagcatatcaaacggttaaacttgattcgtcgtagc
attccggccttacaaaaagcccccatgagtcaggtaaatgaatggggtagtggcatgagt
tttattcgagattataacaacggagaaagttatgccgtggttgggttagccatgggagga
caacaaaccattaccgttagcaatgttcgcaatggtaattatgttgatgccgtgacgggt
cataccatcaatgtcagtgggggttctctttccttttccgttcagggtaattcggcggga
atttatgtcctcaatggctttggaaaaattggtgacgatggggtttatttacggtga
DBGET
integrated database retrieval system
