Cycloclasticus sp. P1: Q91_0004
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Entry
Q91_0004 CDS
T02265
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cyq
Cycloclasticus sp. P1
Brite
KEGG Orthology (KO) [BR:
cyq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cyq03032
]
Q91_0004 (gyrB)
03400 DNA repair and recombination proteins [BR:
cyq03400
]
Q91_0004 (gyrB)
Enzymes [BR:
cyq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Q91_0004 (gyrB)
DNA replication proteins [BR:
cyq03032
]
Prokaryotic type
DNA Topoisomerases
Q91_0004 (gyrB)
DNA repair and recombination proteins [BR:
cyq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q91_0004 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFT66045
UniProt:
K0C0H0
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All DBs
Position
3704..6118
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AA seq
804 aa
AA seq
DB search
MSEEKNNETYDSSNIQVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEAVDNSIDEALAGY
CTEVGVIIHEDNSVTITDDGRGIPVDIHPDEGRSAAEVIMTVLHAGGKFNDNAYKVSGGL
HGVGVSVVNALSDELELTINREGSQHYQLYKKGEPVEPLKVVGPTEKTGTSLRFKPSIGT
FSNIEFHFDLLAKRLRELSFLNSGVRIRLSDERTAKEEIFEYEGGIKAFVNHLNKNKSQI
HENIIYINVDKNDVNVEVALQWNDSYQENIFCYTNNIPQRDGGTHLAGFRAGLTRTLNQY
IEGSGLAKKQKVTTSGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKSIVESSLAEA
LQEFLLENPTEAKEIAGKMLEAARARDAARKAREMTRRKSALDIAGLPGKLADCQEKDPA
LSEIFLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLSSDEVGTLITALGC
GIGKEEYKPENLRYHKIIIMTDADVDGSHIRTLLLTFFYRQMPELIENGNVYIAQPPLYK
VKKGKQEYYVKDDNELNSYLLQLALQKASLVINETTPAITGLALEELAKEHIQIEGMIAR
LAGRYDELILNELLVSTEITESVSEDELNDWLQDLEKNLNGIESCPTQYSLSLKYQQDNW
SVHCITMSHGVEKSFEMPRLFFKSGEYKRLVSFGKTLVGMFEEDTHLNIADKKHTVTSFK
EVFELLMKEARKGQQIQRYKGLGEMNPDQLWETTLDADSRRLLQVRIEDAIAADGVFTTL
MGDEVEPRRNFIEKNALEVANLDV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaagaaaaaaacaatgagacttatgattcatcaaatatacaagttctaaagggc
ttagatgcggttagaaagcgcccaggaatgtatataggtgataccgatgatggttcaggc
ttacatcatatggtgtttgaggcggttgataattctattgatgaggctttagcaggctac
tgcacagaggttggtgtaattattcatgaagataattcggttactatcacagatgacggt
cgtggtattcctgttgatatccatcccgatgaggggagatcagctgctgaagtcattatg
acggtgctccacgcaggcggtaagtttaatgataacgcttacaaagtgtccggtggattg
catggtgtgggtgtgtctgttgttaacgcgctatctgacgaattagagttaactataaac
agggaaggtagtcagcattatcagctttataaaaaaggtgaacctgtagagccgttaaaa
gttgtaggaccaactgaaaaaacaggaacaagtctgaggtttaaaccaagtatcggtacc
ttcagtaatattgaatttcattttgacttattagcaaaaaggctacgagaattatcgttt
ttgaattctggtgtaagaattaggttgtcggatgagcgcacagcaaaagaagagatcttt
gaatatgaaggtgggattaaagcgtttgttaatcacctaaataaaaataaatctcaaatc
catgaaaatattatttatatcaacgtagataagaatgatgtgaatgtggaggtggctttg
caatggaatgattcttatcaagagaatattttttgttatacaaataacattcctcagaga
gatggggggacacatttagcaggttttagagcaggtctcactcgaacattaaatcaatat
atagaaggtagcggcctagcaaaaaaacagaaggtgacaacatcgggtgatgatgcgcgt
gaagggctgacggcagtcttatcagttaaagtaccagatcctaagttttcatcacaaacg
aaagacaagttggtgtcttcggaagtgaaatccattgttgaatcatccttagctgaagca
ctacaagaatttttgttagaaaacccaacagaagcaaaagaaatagctggcaaaatgcta
gaagcagccagggcgagagatgcggctagaaaagcaagggagatgacacgacgtaagtct
gctttagatattgctggtttgcctgggaaattagctgattgccaagaaaaagaccctgca
ttatcagaaatatttctagtggaaggggactcggctggaggctcagcaaagcaaggcaga
gatcgaagaactcaagcgatattgccgttgaaaggaaaaatactcaatgtagaaaaagct
cggttcgataaaatgttatcgtcggatgaagtgggaaccttaataacagcattgggttgt
ggtattggtaaggaagagtataagccagaaaatcttcgttatcataagatcattatcatg
acagatgccgatgtggatggctcacatatacgaacattgttattaacttttttctatcgc
caaatgcctgagttgattgagaatggtaatgtctatattgcgcaaccgcctttatataag
gtaaaaaaaggtaaacaagaatattatgttaaggatgataatgagctgaatagttacctt
ctacaattggctttacaaaaagcaagtttagttattaatgagacaacaccagctattaca
gggcttgcgctagaagaacttgcaaaagaacatattcaaattgaaggaatgattgcgaga
ctggcggggcgttatgatgagttgattttaaacgagctattggtttctactgaaataaca
gaatctgttagtgaagacgagttaaatgattggttacaagacttagaaaaaaacctaaac
ggaatagaaagttgcccaacccaatatagtttgtcattaaagtaccaacaagataattgg
tcggttcactgtataaccatgtctcatggagtagagaaatcttttgaaatgccacgtcta
ttctttaaatcaggtgaatataaacgcttagtcagttttggtaaaacattagtgggtatg
tttgaggaagacacgcaccttaatattgctgataagaaacatactgtgactagttttaaa
gaagtttttgaattattaatgaaagaagcaagaaaaggtcaacaaatccagcgttataaa
gggctaggagaaatgaacccagatcaactatgggagacaacattagatgcagactcaaga
cgtttattgcaggtaagaatagaggatgccattgcagctgatggagtgtttacaacatta
atgggagatgaagtagaacctaggcgaaactttatagaaaaaaacgcattagaagtagca
aacttagatgtgtag
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