Cycloclasticus sp. P1: Q91_0534
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Entry
Q91_0534 CDS
T02265
Symbol
sbcB
Name
(GenBank) Exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
cyq
Cycloclasticus sp. P1
Pathway
cyq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Q91_0534 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyq03400
]
Q91_0534 (sbcB)
Enzymes [BR:
cyq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Q91_0534 (sbcB)
DNA repair and recombination proteins [BR:
cyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Q91_0534 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q91_0534 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Q91_0534 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
GAGA
Motif
Other DBs
NCBI-ProteinID:
AFT66572
UniProt:
K0C4F9
LinkDB
All DBs
Position
542178..543623
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AA seq
481 aa
AA seq
DB search
MSETYYWYDYETTGIDPARDRVVQFAGIRTDLNFNPVANPDVFYCKLHDDILPHPEACLI
TGITPQHAIREGLLESEFIKRVHREFSTPQTCVVGYNSIRFDDEFTRHLLYRNFFDPYAR
EWKSGNSRWDLIDLVRLTHALRPDGINWPQREDGAASFKLEELTKANGILHEAAHDALSD
VYATIELAKLIKQQQPRIYSWGLSLRNKKKAAENLDLIHNTAVIHVSSKYPAAQDCLAVV
VPIAAHPVNKNGVLVFDLSADPTELIDLTAEEIHQRLYTPTAELNEGQKRLPLKTVHINK
SPMLAPLSTLTTEVKNKLNIDLLRCEENRQKILGAGIEKKLAEVFSINTFESATDPDLML
YSGGFFSPIDVQNMTQIRACPIDKLAELSLPFEDERLEEMLFRYRARNYPETLNEVEKTQ
WQAYRHDCFIKEHNDGRLTLKAYFERLDELVVEGDWSEEQQVLLEELIDYGEAVADSLVS
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgaaacatactactggtacgactacgaaacaacgggcattgatcctgctagagat
cgtgtggtccagtttgcgggtatacgtacggatttaaactttaatccagttgcaaacccc
gatgttttttattgtaaattgcatgatgatatcttgcctcacccagaagcctgtctaatt
actggaattacaccacaacatgcaatcagggaaggtttattagaaagcgaatttattaag
cgagtgcaccgtgagtttagtacgcctcaaacatgtgtcgttggatacaacagtattcga
tttgatgatgaatttacaaggcaccttttatatagaaattttttcgacccttatgcccgt
gaatggaagtctggcaactcacgttgggatttaatagacctagttcgattgacacatgct
cttagaccagatggaattaattggccacaacgtgaagatggcgcggctagttttaaatta
gaagagctgactaaagcgaatggtatcttgcatgaggccgcacatgatgccttatcagat
gtatatgccactattgaattagcaaagcttattaagcaacaacaacctagaatttatagt
tggggcttatcactgcgaaataaaaaaaaagccgcggaaaaccttgacctgatacacaat
accgctgttatacatgtgtcgagtaaataccctgccgcacaagattgtttagcagttgtt
gtccccattgctgctcacccagtgaataaaaatggagtgctggtttttgatctatctgct
gacccaacagagcttattgacttaacagctgaagaaatccaccagcgattatacacacct
acggctgaattaaatgaaggacagaagcgcctgcctcttaagaccgttcatattaataaa
tcaccaatgttggcacccttaagtaccctgactacagaggtcaaaaataaattaaatatt
gatttactgcggtgcgaagaaaataggcaaaaaatactcggtgcgggtattgaaaaaaaa
ctagcagaagttttctctattaatacattcgaaagcgctacagaccctgatttaatgcta
tatagtggcggtttttttagccctatagatgtgcaaaatatgacgcaaatacgtgcttgt
ccaatagataaattggcagagttatcgttgccatttgaggatgagcgtttagaagaaatg
ttgtttcgttatagagcaagaaattacccggaaactcttaatgaggtggaaaaaacgcaa
tggcaagcatatcgccacgattgttttattaaagaacataatgatggacgtttaacctta
aaagcatattttgaaaggcttgatgagttagtggttgagggtgattggagtgaagaacag
caagtgctactagaagaattaattgattacggtgaagcagttgccgacagtttggtatca
gactaa
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