Cycloclasticus sp. P1: Q91_1045
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Entry
Q91_1045 CDS
T02265
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cyq
Cycloclasticus sp. P1
Pathway
cyq03410
Base excision repair
cyq03430
Mismatch repair
cyq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q91_1045 (recJ)
03430 Mismatch repair
Q91_1045 (recJ)
03440 Homologous recombination
Q91_1045 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyq03400
]
Q91_1045 (recJ)
DNA repair and recombination proteins [BR:
cyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Q91_1045 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Q91_1045 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Q91_1045 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
DUF2065
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AFT67083
UniProt:
K0C3G2
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All DBs
Position
1109948..1111708
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AA seq
586 aa
AA seq
DB search
MAGETELASSSIVIKHRESTDHDSDALPDLHPVLRQVYLNRGVTHEQQLDRTLKNLPNYQ
RLSGIDKAVSLIKTAIKTDQKILIVADFDADGATSCAVAIRGLRMLGATNLDFVVPDRFK
FGYGLTPEIVDVALELKPDLLITVDNGISSVEGVAHAIKKGCQVIVTDHHLPPKTLPNAD
AIVNPQLQGDEFPSKSLAGVGVIFYVLLALRAALKIEGVFDKQPVPNLANLLDIVALGTV
ADVVPLDELNRKLVYQGLLRIQAKKCVPGIIALLNIAKREPERVVSSDLGFAIGPRLNAA
GRLDDMSLGIQCLLTDSEQQARDMAEQLDMLNIERRSIEEDMKQDAYKILASLKPSQHQH
DQWGVCLFDEYWHQGVIGILASRIKEKLNRPVIAFAKGDGEDVKGSARSIPGLHIRDTLD
DVASLHPGLLKKFGGHAMAAGLTIAENNLSLFIEAFNVAVKKRLNNELPDDVLLVDGEVP
DNDINLTFAETLRQAGPWGQNFPEPVFVGRFKVKQARILSQKHVKLSFETLSNNRVIDAI
YFNVDNPDSIIGLNEVVVAYQLDVNTYMGRSRVQLLVRHLEEVKQF
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgaaaccgaactagcaagctcatctattgttataaaacatcgtgaatcaact
gaccatgattcagacgctttgccagatttacatcctgttttacggcaagtgtacttaaat
cgtggggttacccatgagcaacaacttgaccgtacattaaagaacttaccgaattatcaa
cgcctttcaggtattgataaagctgtcagccttattaagacggcaattaaaacagatcaa
aaaatactcattgtggctgattttgatgcggatggtgccacttcgtgtgcggtagctatt
agaggtttacggatgttgggtgcaactaatttagactttgttgtacccgaccgctttaaa
tttggttatgggctaacgcctgaaattgttgatgttgcactagagttaaagccagattta
ttaatcacggtagacaacggtatttctagtgtggaaggggttgcgcatgctatcaagaaa
ggctgccaagtcattgttactgatcatcatttaccacctaaaacactaccaaatgcagat
gctatcgttaatccacagctacagggtgatgagtttcctagtaaatccttagcgggtgtt
ggcgtcatcttttatgttttattggcactgagagccgccttaaaaattgaaggtgtgttt
gataagcaaccagtgcctaatcttgcaaacctactcgatattgtagcgcttggtacggtg
gcagatgtggtacccctagatgaacttaaccgtaaattggtctatcaaggcttgcttagg
atacaagcaaaaaaatgcgttccagggattattgccttacttaatattgctaagcgtgaa
ccagagcgtgttgtttctagtgatttaggttttgctattggtccacggttaaatgccgcc
gggcgacttgatgatatgtctctcggtattcaatgcttgctcaccgatagtgaacaacag
gcacgcgatatggctgagcaattggacatgttgaatatagagcgtcgttcaattgaagag
gatatgaagcaagatgcatacaagattttggcttcgttaaaaccaagtcagcatcaacat
gatcaatggggtgtttgtttgttcgatgaatactggcatcaaggtgtgataggtatactg
gcatcgcgaattaaagaaaaacttaatcgaccagtgattgctttcgcaaagggtgatggt
gaagatgtaaaaggctcagcacgttcgatccccgggttacacataagagatacgctagac
gatgtggctagtttacaccctgggttattaaaaaaattcggtggtcatgcaatggcggca
gggttgacgattgctgaaaataatttaagcctatttatcgaggcgtttaatgtagccgtt
aaaaaacgtcttaataatgaattgcctgatgatgtgttattagtagacggagaggtgcct
gataacgatattaatttaacatttgctgaaacacttcgacaagctggaccttggggtcaa
aactttccggaaccggtttttgttggtcgttttaaggtaaagcaagcgcgaattttgtca
caaaaacacgtgaagttatcttttgagacgttaagtaacaacagagtgatagacgcgatt
tattttaatgtagataatccagacagtattattggtttaaatgaggtggttgttgcttat
caattagatgttaacacctatatggggcgctcaagggtgcaattattagttaggcatcta
gaagaagtgaagcaattttaa
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