Cycloclasticus sp. P1: Q91_1861
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Entry
Q91_1861 CDS
T02265
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cyq
Cycloclasticus sp. P1
Pathway
cyq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q91_1861 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyq03021
]
Q91_1861 (rho)
03019 Messenger RNA biogenesis [BR:
cyq03019
]
Q91_1861 (rho)
Transcription machinery [BR:
cyq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Q91_1861 (rho)
Messenger RNA biogenesis [BR:
cyq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Q91_1861 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
Mor
S1CSD-TOTE-2
Spore_III_AA
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFT67895
LinkDB
All DBs
Position
complement(1948514..1949770)
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AA seq
418 aa
AA seq
DB search
MNLTELKRKPATEILELAKELGVDNTGRSLKQTTVFQILKKIAKKGDDVYGDGVLEILSD
GFGFLRSADGSFLAGPDDIYVSPSQIRRFGLRTGDTISGKIRPPKDSERYFALLKVDKLN
YEKPEHAKNKIAFKDLTPIFPNERLTLEMGNGTTEDLTSRVIDLVSPIGKGQRGLIVSPP
KAGKTMILQNLAHSIAANNPESHLMVLLIDERPEEVTEMSRTVKGEVISSTFDEPASRHV
QVAEMVIEKAKRMVEHKRDVIILLDSITRLGRAYNTVAPSSGKILTGGVDANALERPKRF
FGAARNIEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNMELHLERKIAEKRIYPAINV
NRSGTRREEYLVDADILQKTWILRKILNPMDEMGAIEFLLERFKKTKTNGEFFDSMKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacctaactgagctgaagcgtaaacccgcaactgaaatccttgaacttgcgaaagaa
cttggtgttgataacactggacgatcattaaaacaaaccactgtctttcaaattcttaag
aaaatagccaaaaaaggcgatgatgtatatggtgatggggttcttgaaatattatcagat
ggttttgggtttttaaggtcggcagatggttcgtttttagcgggtccagatgatatttat
gtctcgccgagtcagattcgtcggtttggtttaagaacgggggataccatttcgggaaaa
attcgcccacctaaagatagtgagcgttactttgcactattgaaggtcgataagcttaat
tatgaaaaaccagaacatgcaaaaaacaaaatagcgtttaaggacttaacgcctattttc
cccaatgaacgtttaactttagaaatggggaatggtaccactgaagatttaacttcccgt
gttattgacttggtatcacccattggtaaggggcaacgtggcttaattgtgtcaccgcct
aaagctggtaagaccatgattctgcaaaatttagcgcactctattgctgcaaataatcca
gaaagccatttaatggttctattgatcgatgagcggcctgaagaggtgacagagatgtca
cgtaccgttaaaggtgaagtgatttccagtacatttgatgagcctgcttctcgccatgtt
caggtggccgaaatggttattgaaaaagcaaaaagaatggtggagcacaaaagagacgtt
attattttgttagactctattacccgtttgggtcgagcctacaatactgtagcgccttca
tcaggtaaaattttgactggtggtgtggatgctaatgcacttgaacgtcctaaacgtttt
tttggtgcggcacgtaatattgaagaaggcggtagtttgacaattattgcaacagctctc
gttgaaaccggttcgcgtatggacgatgtgatttacgaggagtttaaaggcacgggtaat
atggagcttcatcttgagcgtaaaattgctgaaaaacgtatttacccagcgattaacgtt
aaccgttcaggcacacgtcgagaagaatatttagtggacgctgatatccttcaaaaaact
tggattctccgcaaaattcttaatccaatggatgaaatgggtgcgattgagtttttgtta
gaacgctttaagaaaacaaaaacaaatggcgagttctttgattcaatgaagcgttag
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