Cycloclasticus sp. P1: Q91_1863
Help
Entry
Q91_1863 CDS
T02265
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
cyq
Cycloclasticus sp. P1
Pathway
cyq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q91_1863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyq03019
]
Q91_1863
Enzymes [BR:
cyq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Q91_1863
Messenger RNA biogenesis [BR:
cyq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q91_1863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFT67897
LinkDB
All DBs
Position
1950419..1951681
Genome browser
AA seq
420 aa
AA seq
DB search
MSDTHLTDTQFSSLGLTAPLIQGLDEANFIKCTPIQEQTLPISLLGNDVAGQAQTGTGKT
IAFLLATYHTLLTKTPADNKKGVRALILAPTRELAIQIANDAKIIGKHTDIKVGLAYGGT
DYDKQRKTIEDGVDILIGTPGRTIDFFKQKVFNLRNTEVLVLDEADRMFDLGFINDIRYL
LRRLPKPENRLNLLFSATLSFKVTELAYEHMNNPVMVRVEPEQITAKQVVESVYYPADNE
KIPLLLHLLTNEKPERGIIFINTKHTADRLHRYLKGNDFDNAVLSGDVPQKKRQTILTRF
QDGKLPLLIATDVAARGLHIPAVSHVFNFDLPQDAEDYVHRIGRTARSGASGKAISFACE
TYAYSLPDIEAYISHKIPFENIDGASLPDVKPATKRTAKPSTHKRPANARTQQKSRSHKR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacacccatcttactgatactcaattttcttcacttgggctcactgccccttta
attcaaggtttagacgaggctaatttcataaagtgcacgcctattcaggaacaaacctta
cccatcagtttgctcggcaacgatgtcgcaggacaggcgcaaacaggcactggaaaaacc
attgcttttttactcgccacgtatcacaccctactaacaaaaacgcctgccgataataaa
aaaggtgttagggcgcttattcttgctccaacgcgtgaactggcgatacaaattgcaaat
gatgcaaaaattattggtaaacacactgacattaaagtcggccttgcctacggtggaaca
gattacgataaacaacgtaaaaccatagaggatggtgtggatattttaattggcaccccg
ggacgaaccatcgattttttcaaacaaaaagtatttaaccttagaaacaccgaggtccta
gtactagatgaagcagacagaatgtttgaccttgggtttataaatgatattcgctattta
ttacgacgattacctaaacctgaaaaccgtttaaacttattgttctcggcaacactttcg
ttcaaagttaccgaattggcttacgagcatatgaacaaccctgtaatggttcgcgttgaa
cccgaacaaataactgcaaaacaagtggttgagtctgtttattaccctgctgataatgaa
aaaatccccttacttcttcatctgctgacaaatgagaaacccgaaagagggattattttc
attaataccaaacacactgcagaccgtttacatcgttacctaaagggcaacgactttgat
aacgccgtgctttcaggcgatgtaccacaaaaaaaacgacaaaccattttaactcgcttt
caagacggcaaactacctttattaattgccactgatgtggccgctcgtggattacacatt
cctgctgttagtcatgtatttaattttgacctacctcaagatgccgaagactatgttcac
cgaattggtagaaccgcccgctcaggcgccagcggtaaagccattagttttgcctgtgaa
acctatgcttactcactgcctgacattgaagcctatatatcacacaaaattcctttcgaa
aatattgatggcgcctccttaccggatgttaaaccagctactaaaagaaccgctaaacca
tctactcacaaacgcccagcaaacgctcgaacacaacaaaaatcacgctcacataaacgg
taa
DBGET
integrated database retrieval system
