Cyanobacterium sp. IPPAS B-1200: A5482_001520
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Entry
A5482_001520 CDS
T10868
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
cyr Cyanobacterium sp. IPPAS B-1200
Pathway
cyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A5482_001520 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyr03400
]
A5482_001520 (recO)
DNA repair and recombination proteins [BR:
cyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A5482_001520 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A5482_001520 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
DUF4026_C
CutA1
DUF7833
Motif
Other DBs
NCBI-ProteinID:
XPM69094
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All DBs
Position
complement(356200..357012)
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AA seq
270 aa
AA seq
DB search
MSQTYQTTGIILKQNPFKENDLLVTIFSPEYGLVRAIAPGARKYKSRLRGRIQPLVINEF
LIVKGTNLDRLIQAETKESYPKLSHNLGKLTISQYLAEIILNLAPTEQPQIELYNTFNKH
LKTLETLDNQINFTPYLAQGVFNILILTGIAPEVNYCLTTETPLIPNFAQSHWRVGFSFA
NGGLIQLSSMNNSQNNYINTKINALELFFLQCLSNGKQQEMEKEIKQIHSTETINLAWIN
IERSLKNYIEFYLGHSLKSAAMINFALNYT
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaacttatcaaactacgggcattattctcaaacaaaatccgtttaaggaaaat
gatttattagtcactatcttttctcctgaatatgggttagtacgggcgatcgccccagga
gccagaaaatataaatcaagattaagaggaaggattcaacccctagtaataaacgaattt
ttaatcgttaaaggaacaaatttagatcgattaattcaggcagaaactaaagaatcatac
cctaaactaagtcataatttaggaaaactaaccatcagtcaatacctagcagaaataatc
cttaatttagcacccacagaacaacctcaaatagaattatataatacttttaataaacac
ttaaaaactttagaaacattagataatcaaattaatttcaccccctatttagcccaagga
gtatttaatatactaattctgacaggtatagctccagaagtaaactattgcctcaccaca
gaaacccctctaattcctaactttgctcaatcccattggcgagtaggatttagttttgct
aatggtggtttaattcaattatcatctatgaataatagtcaaaacaattatattaatact
aaaattaatgccttagaattattttttttacaatgtttatctaacggaaaacaacaggaa
atggaaaaggaaatcaaacagatacactctacagaaacaattaatttagcttggataaat
attgaaagaagcctaaaaaactatatagaattttatcttggtcattccttaaaatctgcc
gcaatgatcaattttgctcttaattacacttaa
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