Cyanobacterium sp. IPPAS B-1200: A5482_004515
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Entry
A5482_004515 CDS
T10868
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cyr Cyanobacterium sp. IPPAS B-1200
Brite
KEGG Orthology (KO) [BR:
cyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyr03016
]
A5482_004515
Enzymes [BR:
cyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
A5482_004515
Transfer RNA biogenesis [BR:
cyr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
A5482_004515
Prokaryotic type
A5482_004515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
ApeA_NTD1
Motif
Other DBs
NCBI-ProteinID:
XPM69646
LinkDB
All DBs
Position
complement(988492..989427)
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AA seq
311 aa
AA seq
DB search
MEVTFLGTSSGVPTRSRNVSSVALRLTQRGEIWLFDCGEGTQHQILRSELKTSQLKKIFV
THMHGDHIFGLMGLLASCGLGAHAENVEVYGPPGLDAYLKACMKYSQTYFPYGVHFKTVS
PGVIYEDDEYIVSTEMLKHRVTAFGYRISEKDKAGKFDVDKAKKMGIPSGPIYGKLKKGE
TITLEDGRTINGSQLCGPTEIGRKFVYCTDTVFCESAIALSEDADVLIHEATFAHQDAQM
AFERMHSTTTMAAQVALAAQVKKLIMTHFSPRYAPGNTLQLNDLLKEAQAIFPETILAYD
FLSYEIPRRIN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtggaagtaacttttttaggtactagctcaggagtacccacccgatcaagaaatgtatct
agtgtggcacttaggttaactcagcggggggaaatttggttatttgattgcggagaaggt
actcaacaccaaattttgcgcagtgaattaaaaacctcccaacttaaaaaaatcttcgtt
acccatatgcacggagatcatatttttggtttgatgggcttactcgctagttgtgggttg
ggtgcccatgcagaaaatgtggaagtttatgggcctcctgggttagatgcctatttaaag
gcttgtatgaagtattctcaaacttattttccctatggtgttcattttaaaacggtttct
cctggggttatctacgaggatgatgaatatatagttagtaccgagatgttaaaacatcgt
gtaacggcttttggttatcgcatcagtgaaaaggataaggctggtaagtttgatgtggac
aaggcaaaaaaaatggggattcccagtggtcctatttatggaaagttgaaaaagggtgaa
accattaccctagaggatggacgcactatcaatggttctcaattgtgtgggccgacggaa
attgggcgtaaatttgtttattgtactgatactgttttttgtgaaagtgcgatcgccctt
agcgaagatgcggacgtactaattcatgaagccacctttgcccaccaagacgcacaaatg
gcctttgaaagaatgcactccaccaccaccatggcagcccaagtggctcttgctgctcag
gtcaaaaaacttatcatgactcactttagcccccgctatgcccctggtaatacccttcag
ttaaatgatttacttaaggaggctcaggctattttccccgagactattcttgcttatgat
tttctgagctacgaaataccaagacgaattaattga
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