Cyanobacterium sp. IPPAS B-1200: A5482_008035
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Entry
A5482_008035 CDS
T10868
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cyr Cyanobacterium sp. IPPAS B-1200
Pathway
cyr00300
Lysine biosynthesis
cyr00470
D-Amino acid metabolism
cyr01100
Metabolic pathways
cyr01110
Biosynthesis of secondary metabolites
cyr01120
Microbial metabolism in diverse environments
cyr01230
Biosynthesis of amino acids
Module
cyr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cyr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A5482_008035 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A5482_008035 (dapF)
Enzymes [BR:
cyr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
A5482_008035 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
XPM67626
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Position
complement(1750750..1751583)
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AA seq
277 aa
AA seq
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MQFSKYHGLGNDFILIDNRQSDQPLVTPQEAVQMCDRHFGIGADGVIFVLPPQNHCDYTM
IIFNSDGSEPEMCGNGIRCFAQFVTELEGKEEVGKQYPIHTLAGTITPTIKGEGMIRVDM
GEPELNPAKIPTTLNQGGEKVVSESLTVADKEYQVSCVSMGNPHCLVFVDKVADVELEKI
GPLFETHEVFPQKTNTEFIEVVRPDYLKMRVWERGAGITLACGTGACATVVAGVLNGKCD
RICTVELPGGCLEIEWNQEDNHIYMTGPAVKAFSGNL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttagcaaatatcacggattaggtaatgactttattttgatcgataatcgtcaa
tctgatcaacccctcgttaccccccaagaagcagtacaaatgtgcgatcgccattttggt
atcggcgccgatggagtcatttttgtattacccccccaaaaccattgtgattataccatg
ataatctttaactccgatggttctgagcctgagatgtgcggtaacgggattcgttgtttt
gcccagtttgtgacggaattagaaggcaaggaggaagtaggaaaacaataccccatccac
actttagccggtaccattacccctaccatcaagggtgagggcatgattcgggtagatatg
ggtgagcctgaattaaacccggccaaaatccccaccactttaaaccaagggggagaaaag
gttgttagcgaatccttaaccgtagcagacaaagaatatcaagtatcctgtgtgagtatg
ggaaatccccactgtcttgtatttgtagataaagtggcagacgttgagttagaaaaaatt
gggcctttatttgaaactcacgaagtttttcctcagaaaaccaatacggaatttatcgaa
gtagtacgccctgattacctcaaaatgagggtttgggaaaggggtgcaggaattaccctc
gcctgtggtacaggggcttgtgccacggtggtagcgggagttttaaatggtaaatgcgat
cgcatttgtaccgtagaattaccaggaggatgtttagaaatcgaatggaatcaagaagat
aaccatatttatatgacagggcctgcggttaaggcattttcaggcaatttgtaa
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