Cyanobacterium sp. IPPAS B-1200: A5482_012690
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Entry
A5482_012690 CDS
T10868
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cyr Cyanobacterium sp. IPPAS B-1200
Pathway
cyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A5482_012690 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyr03400
]
A5482_012690 (uvrA)
DNA repair and recombination proteins [BR:
cyr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A5482_012690 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A5482_012690 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_23
AAA_16
RsgA_GTPase
nSTAND1
nSTAND3
AAA_22
DnaJ_CXXCXGXG
Viral_helicase1
AAA_18
NACHT
MMR_HSR1
MeaB
cobW
Say1_Mug180
Motif
Other DBs
NCBI-ProteinID:
XPM68487
LinkDB
All DBs
Position
complement(2715579..2718362)
Genome browser
AA seq
927 aa
AA seq
DB search
MIRIRGARQHNLKNIDLELPRNQLIVFTGVSGSGKSSLAFDTIFAEGQRRYVESLSAYAR
QFLGQLDKPDVDSIEGLSPAISIDQKSTSHNPRSTVGTVTEIYDYLRLLYGRAGEPHCPI
CGQSIAPQTIDEMCDRILALPEKTKLHLLAPVVRGKKGNHHQLLSSLSSQGFVRVKINGE
IRELGDNIELKSSKKHDISVLVDRLVVKSNIQERLADSLGTCLKIAEGVAMVEIVGKEEE
TIIFSENFACPTHGAVMEELSPRLFSFNSPYGACGHCHGLGSLKQFSPDLIVPDPDAMVL
RAIAPWADKENPYYTSLLEYVATEYGFKLSDKWHTLTEKQQHIILHGDKEIQQIQYGYYR
GVIPMLEKTYQESNSEVIKQKLEQYIEHQTCEVCHGKRLKPEALAVKLGQYNIHDLTSVS
IGECLNRVNNINLTPKQAQIGELALKEIKARLEFLLNVGLDYLTLDRTAMTLSGGEAQRI
RLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLLETLKKLRDLDNTLIIVEHDEDTIKSAD
YIVDIGPKAGVHGGEIVYQGNYKNFLKSKESLTSAYLSGRKKIDIPETRREGNGNFLTLK
NCHRNNLKNIDVQIPLGKFVSITGVSGSGKSTLINELLYPALKHHLQRNTPFPKQLDSLE
GIEAVDKVIVIDQSPIGRTPRSNPATYTGVFDVIREMFAQTTEAKARGYKAGRFSFNVKG
GRCEACGGQGVNVISMNFLPDVYVQCDICKGARYNRETLQVKYKGYSIADVLDMTVEEAL
KVFENIPRAVNRLQTLVDVGLTYVKLGQSAPTLSGGEAQRVKLATELSRRATGKTVYLID
EPTTGLSFYDVHHLLNVLQKLADKGNSIIVIEHNLDVIRCADWIIDLGLEGGNKGGELVA
IGTPEDIAKSKKSHLAKYLKNITKCQR
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtattcgtggcgctagacaacataacctcaaaaatattgatttagaattaccc
cgcaatcagttaatcgtctttacgggggtatcgggtagcggaaaatcctcccttgctttt
gatactatttttgccgaagggcaaaggcgttatgtagagtcattaagtgcctatgcccga
cagtttttagggcaactggataaacccgatgtagatagcattgaagggctatcccctgcc
atttctatcgatcaaaaatccacctcccataatcctcgctcaacggtaggcacggttaca
gaaatttacgactacttgcgattactctatggtagggcaggagaaccccattgtcctatc
tgtggtcaatccatcgctccgcaaaccatcgatgaaatgtgcgatcgcattttagcttta
cctgaaaaaactaagctacatttacttgcccctgtggtacgagggaaaaagggtaaccat
catcaactactatctagtttaagctctcagggatttgtgagggtaaaaataaatggggag
attcgggagttaggggataatattgagctaaaatcttctaaaaaacatgatataagcgta
ctggttgatcgcctcgtagtcaagagtaatattcaagaaagattagccgattccctaggc
acctgtttaaaaattgctgagggggttgccatggtggaaattgtcggtaaagaggaagaa
accatcatattctctgaaaactttgcttgtccaacccatggggcagtaatggaagaatta
tcacctcgtcttttttccttcaactctccctatggtgcttgtggacattgtcacggtttg
ggtagtctaaagcagttttctcctgatttgattgtaccagatcctgatgccatggttcta
agggcgatcgccccttgggcagacaaagaaaacccctactacacatctctcctcgaatat
gtagccacagaatacggcttcaaactaagcgataaatggcataccctcaccgaaaaacaa
caacatatcatcctccacggagacaaagaaattcaacaaatccagtacggttactatcgg
ggcgtaattcccatgctcgaaaaaacttatcaagaaagtaactccgaagtaatcaaacaa
aaactagaacagtacatcgaacatcaaacctgtgaagtgtgccacggtaaaagactgaag
cccgaggcgctcgctgtcaaactaggacaatacaacatccacgacttaaccagcgtctcc
atcggagaatgcctaaatcgagtaaataacatcaacctcacccccaaacaagcccagata
ggagaattggccctcaaagaaatcaaagcaagactagaatttttattaaatgtcggctta
gactatcttaccctagaccgtaccgccatgaccctttcagggggagaagcccaacgcatt
cgccttgccacccaaataggctcaggattaacaggggtattatacgtattagacgagcca
agtatcggtttacatcaacgagataacgatcgcctcttagaaaccctcaaaaaattacga
gatctcgacaatactttaattattgtagaacatgacgaagacacaatcaagagcgctgac
tatatagttgacattggccctaaggcaggagtccacggcggggaaattgtctatcaaggg
aactacaaaaacttcctcaaatcaaaagaatccctcaccagtgcctatttatcaggcaga
aaaaaaattgacatccccgaaaccagaagggaaggaaacggcaactttttaaccctaaaa
aactgtcaccgtaacaatctcaaaaatatagatgtccaaattcccctcggaaaatttgtc
agtatcacaggagtttcaggctcaggaaaatccaccctcatcaatgaattactctatcca
gccctcaaacatcacctccaacgtaacacccctttccccaaacaactagacagcctagaa
ggcatagaagccgttgataaagtcattgtaatcgatcaatctcccatcggacgcactccc
cgctccaatcccgcaacctatacaggggtatttgacgtaattcgggaaatgtttgcccaa
accaccgaagccaaggcgaggggttacaaagcagggcgtttttccttcaacgtcaaaggg
ggaaggtgcgaagcctgtggagggcagggggtaaacgtcatctccatgaattttttacct
gatgtatatgtacagtgtgatatatgcaaaggggcaaggtataacagggaaactttgcaa
gtgaaatataaaggttattccatcgccgatgtgttggatatgacggtagaagaagccctc
aaggtatttgaaaatatcccccgtgccgtaaatcgtttacaaaccctcgtggatgtaggc
ttaacctatgtcaaactaggacaatcagcccctaccctatcggggggagaagcccaacgg
gtaaaactagccacagaattatctcgccgtgccacgggaaaaacggtatatttaattgat
gaacctaccacgggattatctttttatgatgttcaccatcttttaaatgtacttcaaaaa
ttggcagataaaggcaactctatcattgtcattgagcataatttggatgtgataaggtgc
gctgattggattattgatttaggtttggaagggggaaacaagggcggagaattggttgcc
attggcactcctgaagatattgccaaatcaaaaaagtctcatttagctaagtatctgaaa
aatattacaaaatgccaaagataa
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