Cyanobacterium sp. IPPAS B-1200: A5482_013685
Help
Entry
A5482_013685 CDS
T10868
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cyr Cyanobacterium sp. IPPAS B-1200
Brite
KEGG Orthology (KO) [BR:
cyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyr03016
]
A5482_013685 (truB)
Enzymes [BR:
cyr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A5482_013685 (truB)
Transfer RNA biogenesis [BR:
cyr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A5482_013685 (truB)
Prokaryotic type
A5482_013685 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
XPM70260
LinkDB
All DBs
Position
2940473..2941369
Genome browser
AA seq
298 aa
AA seq
DB search
MMGFINLHKPKGFSSHDCVARVRRILNTKKVGHGGTLDPLATGVLPIAVGRATRLLQFLP
TKKAYRAKVRFGLTTTTDDLEGEIITQEKCPDLSVEIISNFIPNFIGNIEQIPPIYSAIK
QNGKKLYELARQGKEVDIPSRKVEIFDIKILSWQSGDYPELDLYIICGAGTYIRAIARDL
GQKVSTGATLAKLERTLSCNLEIKNSINLELLEEQKNNNQLTLIPPDLLLQNLPIINLND
QESWRWQQGQKLSYQGEDNNNFYRTYNNQQQFMGISEIKQGQEGLIIQPKVVVTTTDE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
ataatgggatttattaacctccacaagcccaaggggttttcgtcccatgattgtgttgct
agggtgagaaggatattaaacacaaaaaaagtaggtcatggtggtacattagatcccctc
gctacgggggttctacccattgcagtaggtagggcaactcgtttattacagtttttacct
accaaaaaggcatatcgggcaaaggttagatttgggttaactaccaccaccgacgattta
gaaggagagataattacccaagaaaaatgtcctgatttaagtgtagaaataatttctaat
tttattcctaattttatcggcaatatagaacaaataccgcccatttatagtgccattaag
caaaatggtaagaagttatatgaattggcaaggcaagggaaagaggttgatattcctagt
agaaaagtagaaatatttgatataaaaattcttagttggcagtcaggggattatccagaa
ttagatttatacatcatctgcggggctggtacttatataagggcgatcgcccgtgacctt
gggcaaaaagtaagtacaggggcaactttagccaaattagaaaggacattaagttgtaac
ttagagataaaaaatagtattaatttagagttattagaggagcaaaaaaataataatcaa
ctaaccttaattccccccgatttactcctacaaaatttacccatcataaacctaaatgat
caagaaagttggagatggcaacaaggacaaaaattaagctatcaaggagaagataataat
aacttttatcgtacttataataaccaacaacaatttatgggtattagcgaaattaaacaa
gggcaagaaggattaatcattcaacccaaagtcgttgtcacaactaccgatgaataa
DBGET
integrated database retrieval system
