Cysteiniphilum sp. QT6929: NYP54_00355
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Entry
NYP54_00355 CDS
T09052
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cys
Cysteiniphilum sp. QT6929
Pathway
cys03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cys00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NYP54_00355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cys03019
]
NYP54_00355
03009 Ribosome biogenesis [BR:
cys03009
]
NYP54_00355
Enzymes [BR:
cys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NYP54_00355
Messenger RNA biogenesis [BR:
cys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NYP54_00355
Ribosome biogenesis [BR:
cys03009
]
Prokaryotic type
rRNA helicases
NYP54_00355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_30
Cas3-like_C_2
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WHN65705
LinkDB
All DBs
Position
75702..77456
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AA seq
584 aa
AA seq
DB search
MSTENNESQELSFHNLGLNDKILSAIEAMGYQTPTPIQANTIPFVLQGRDVLGQAQTGTG
KTAAFALPLLNNMDLSGKERMPQVLVLTPTRELAIQVAEAFESFSKNIAKLEVASIYGGQ
EYGRQIQALRRGVQVVVGTAGRVMDHMRKGTLKLDALKALVLDEADEMLRMGFIDDVKWV
LSHTPEACQRLLFSATMPRDVLDIVNEYLREPCKVQIKTKAATAKTIHQRFLVVKGLSKL
DALDRVLEVEDTDGVMVFVKTKTSTIEVADGLKARGHLAAAINGDMQQNQREYIIDQLKA
SKINILVATDVVARGLDVERISHVINYDLPQDNEAYVHRIGRTGRAGREGDAISLIYTRD
LRQLRMLERVIRHTLEEMQLPSAKEITEKRVTRFKHETAEIIRHKDLSKFKELMQEFATE
YGAEADDMVAALAFLAQGDKKLFVKEIQVQESRRSERSDRFDRSERGGRGDRDGRRNDRD
SRFSQRRDERGGRGDRDRGSRRSPDMDMTTYRIEVGRSDGVEPRNIVGAIANEAGINSRN
IGHIKLFDQFSTVDLPSDTPKNVIEHLKKVWVAGKKLEIKEDKR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgagaataatgaatctcaagaattaagctttcataatttgggcttaaacgac
aagatattgtcagctattgaagcaatgggttaccaaacacccacaccgatccaagcaaat
acgattccttttgtattgcaaggtcgtgatgtattaggacaagcgcaaactggaaccggt
aaaaccgcagcatttgcattgccacttctaaataacatggatttatctggcaaagaacgt
atgccacaagtattggtgttaaccccaacacgtgagcttgcgatccaagtggctgaagca
tttgaatctttttctaaaaatattgccaagcttgaagttgcttctatttatggtggtcaa
gaatatggtcgtcaaattcaggcattacgtcgtggtgtgcaggttgtcgttggtaccgca
ggtcgtgtaatggatcatatgcgtaaaggcacattaaagctagatgcattaaaagcatta
gtattagatgaagcggatgaaatgttacgtatgggctttattgatgatgttaaatgggtg
ttgtcacacacgccggaagcatgtcagcgtttgctgttctcagcaaccatgccgcgtgat
gtgttggatattgttaatgaatatctacgtgaaccatgtaaagtacagatcaaaacaaaa
gcagcaaccgctaagacaattcatcaacgctttttagtggtcaaaggtttatctaaatta
gatgcgcttgatcgcgtattagaagttgaagataccgatggtgtaatggtgtttgttaaa
accaaaacatcaaccatcgaagtagctgatggcttaaaagcgcgtggtcacttggctgca
gcgattaatggtgatatgcaacaaaaccaacgtgaatatataattgaccagttgaaagcc
tctaaaattaatattcttgtggcaacagatgttgtggcacgtggtttggatgtcgagcgt
attagtcacgtgattaactatgatttaccacaagataatgaagcatatgtacaccgtatt
ggtcgcacggggcgtgctggacgtgagggtgatgcaatttcattgatttacaccagagat
ttgcgtcaactacgtatgcttgagcgtgttattcgtcatactttggaagagatgcagtta
ccaagtgctaaagaaattactgaaaagcgtgttacgcgctttaagcatgaaactgctgag
attatccgtcataaagacttaagtaagtttaaagaactaatgcaggaatttgcgactgaa
tatggtgctgaagccgatgatatggtggcagcacttgcctttttagcgcaaggcgacaaa
aagctttttgttaaagaaattcaggttcaagagtcaagaaggtcagaaagatctgatcgt
tttgatcgctcagagcgtggcggacgtggtgatcgtgatggtcgtagaaatgatcgcgat
agcagattttcacaacgtcgtgatgagcgtggcggacgtggtgatcgtgatagaggatcg
cgtcgctcaccagatatggatatgacgacttatcgcattgaagtgggtcgtagtgatggt
gttgagccgcgcaatatcgttggtgctattgccaatgaagccggtattaatagccgcaat
attggacatatcaaattatttgatcaattcagtaccgttgatttaccgagtgatacacca
aagaatgttattgagcatttaaagaaagtgtgggtagctggtaagaagcttgaaatcaaa
gaagataaaagataa
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