Cysteiniphilum sp. QT6929: NYP54_01105
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Entry
NYP54_01105 CDS
T09052
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cys
Cysteiniphilum sp. QT6929
Pathway
cys03420
Nucleotide excision repair
cys03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NYP54_01105 (uvrD)
03430 Mismatch repair
NYP54_01105 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cys03400
]
NYP54_01105 (uvrD)
Enzymes [BR:
cys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NYP54_01105 (uvrD)
DNA repair and recombination proteins [BR:
cys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NYP54_01105 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NYP54_01105 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
CarD_TRCF_RID
AAA_11
ResIII
DEAD
HydF_dimer
Rep-A_N
Motif
Other DBs
NCBI-ProteinID:
WHN65848
LinkDB
All DBs
Position
252504..254699
Genome browser
AA seq
731 aa
AA seq
DB search
MTVMLDMIKSLNKAQQEAVLLANENALVLAGAGSGKTRVLTHRIAYLCQEKNVSPLNILA
VTFTNKAAREMRGRVEELLGFSTVGMWIGTFHGIAHRLLRQHAQEIGFDRRFKVLDQDDQ
LQVVKKVIQSLNLDEKYYPPKYFQGFINGKKDEGMRAIDLPTAEFDSEVVKIYQAYEARL
KADNALDFADLLLYAYELFKHNEVLRSYYQKRFQYVLVDEFQDTNSVQYKWLMCLKSQNN
AFMAVGDDDQSIYGWRGAKVENIEHYLADLSPVTVVRLEQNYRSTQLILDAANAVIANNS
KRMGKMLWSQAEKGEPIALYEAFNERDEADYIADKIDDLHHNQSISLTDIAILYRSNAQS
RVIEEALLKRGLSYRIYGGLRFFDRAEIKDALAYMRLLALRADNLAFERVINLPTRGIGN
KTLESIREYAGVHDLSLWHATLQMIEIKAFSSRASQALQRFVDLIEDMSSLKDALTLGQL
MRHVLDASGLMLMYQESKAEKAQQKHENLKELVNAANEFIPPVEDAADEDLLVEFLSFAV
LESGEMQAEDNMDAVQLMTLHTAKGLEFPYVFMTGLEDGLFPSSRSIEVHEKLAEERRLC
YVGITRAMRYLTLSFSKVRHQYGDVNYQIKSRFLDEIPDEYIQYVRQQVNKTPSPKAKKA
SFGMSPFEFMKIQSANSNAFKSGDCVVHPKFGIGVVLKTEGQNDDLCYHIDFQAGGGKKV
LLANMAKLTKL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgatgttagatatgattaaatcgctgaataaagcgcagcaagaagccgtgctt
ttagcaaatgaaaacgcattagttttagccggagcaggcagtggtaagacgcgtgtgtta
acgcatcgcattgcctacttgtgtcaggaaaaaaatgtttcacccttgaatatattggca
gtgacctttaccaataaagcagcacgagagatgcgcggtagggttgaggagcttctaggc
ttttcaaccgttggtatgtggattggcacatttcatggcatagcccacaggttattgcgc
caacatgcacaagagatcggttttgatcgacgctttaaagtgctcgaccaagatgatcaa
ttacaagtcgttaagaaagttatccaaagtttaaacctagatgagaaatattatccacct
aagtattttcaaggctttattaatggcaaaaaagatgaaggaatgcgcgcgattgatttg
ccaacggccgagtttgatagtgaagtggttaaaatatatcaagcttatgaagcgcgccta
aaagcggataatgcattggattttgctgatttgctactatacgcttatgagttgtttaaa
cacaatgaagtgcttcgtagctattatcaaaagcgctttcaatatgtattggttgatgag
tttcaagataccaatagtgtgcaatataaatggttgatgtgtttaaaatcacaaaataac
gcttttatggcggtgggtgatgatgatcaatctatttatggttggcgtggtgctaaggtt
gaaaatatcgagcattatcttgcagatctatcaccggtaacagtcgtgcgtttggagcag
aattatcgctcaacacagctaattttagatgcagctaatgcggtgattgccaataacagt
aaacgcatgggtaagatgctgtggtctcaggctgaaaagggtgaaccaatagcgctttat
gaggcgtttaatgagcgtgatgaagcggattatattgccgataaaattgatgatttacat
cataatcaatctatttccctgactgatattgcgatattgtatcgctctaatgcgcaatcg
cgtgtgattgaagaggcattacttaagcgcgggttgtcttatcgcatttatggaggctta
cgcttttttgatcgcgcagagattaaagatgcattagcctacatgcgtttgcttgcacta
cgcgccgataacttagcctttgagcgggtgattaatctaccaacgcgtggcattggtaat
aaaaccttagaaagtatccgcgagtatgccggagtgcatgatttatccttatggcacgcg
acattacagatgattgaaataaaagcgtttagtagtcgtgcctctcaagcactgcagcga
tttgttgatttgattgaggatatgtcttcgttgaaagatgcattgactttagggcagtta
atgcgtcatgtacttgatgccagtggcttaatgctgatgtatcaggagtcaaaagctgag
aaagcacaacaaaagcatgaaaacttaaaagagttagtcaatgcagccaatgagtttatt
ccgcctgttgaggatgctgctgatgaagatttgctggttgagtttttaagctttgctgtg
cttgagtcaggggagatgcaagctgaggacaatatggatgcggtgcaattgatgacactt
cataccgcaaaagggcttgaatttccttatgtgtttatgacagggcttgaagatggctta
tttccatcatcacgctcgattgaagtgcatgagaaattggctgaagaaagacggctttgt
tatgtgggtattacgcgtgcgatgcgttatctcactttaagctttagtaaagtgcgccat
caatatggcgatgttaattatcagattaagtcgcgatttttagatgagattccggatgag
tatattcagtatgtgcgccagcaagtgaacaaaacgccatcgccaaaagctaagaaagca
agttttggcatgtcgccttttgagtttatgaaaattcaaagtgcaaatagcaatgccttt
aaatcaggtgactgtgttgttcatccaaagtttggtataggcgtggttttaaaaactgaa
ggacaaaatgatgatttgtgttatcacattgactttcaagccggaggtggcaaaaaggtg
ttgcttgccaatatggcgaagctgacaaaattataa
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