Cysteiniphilum sp. QT6929: NYP54_01895
Help
Entry
NYP54_01895 CDS
T09052
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cys
Cysteiniphilum sp. QT6929
Pathway
cys00541
Biosynthesis of various nucleotide sugars
cys01100
Metabolic pathways
cys01250
Biosynthesis of nucleotide sugars
Module
cys_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
cys00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NYP54_01895 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cys01005
]
NYP54_01895 (rfaD)
Enzymes [BR:
cys01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
NYP54_01895 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cys01005
]
Core region
NYP54_01895 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
WHN66004
LinkDB
All DBs
Position
429180..430163
Genome browser
AA seq
327 aa
AA seq
DB search
MIIVTGGAGFIGANIIKQLNLRGHEDILVVDNLKDGHKFVNLVDYEIADYCDQTPFLQAI
ESDLAYYTPNTGLKINPNDITAIIHQGACSATTEWDGQYVMENNYEYSKILLHFAMRHKI
PFIYASSAATYGNNTTFIEERQYEKPVNVYGYSKFLFDQYVRKFLPHAQSQIVGLKYFNV
YGPHETHKGSMASVAYHHYNQFKAHKKVKLFDAYDGFAAGQQMRDFVYVEDAAKVNLWFL
DHPHVSGIFNCGTGKAEPFNNIAHAVIDFYKEGHIEYIEFPEHLKGHYQSYTEANLDKLR
EAGCDVNFRDVKTGVTDYLQWLEKHNK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgattattgttacaggtggcgccggattcattggcgcaaatattattaagcagcttaac
ctacgcggacatgaagatattctcgttgttgacaacctaaaagacgggcataaatttgtt
aatttagttgattatgagattgcagattattgtgaccaaacaccttttttacaagcgatt
gagtctgacttggcttactacacaccaaatacgggcttaaagattaatcctaacgatatt
actgccatcatccatcaaggagcttgctcggcgacaacggagtgggatggtcaatatgtg
atggagaacaactacgaatacagcaagatccttttgcattttgcgatgcgccacaagatt
ccatttatttatgcctctagtgctgctacatatggcaataacacaacctttattgaagag
cgtcaatatgaaaaaccggtgaatgtttatggttactctaaattcttatttgatcaatac
gttcgcaagtttttgccacatgcgcaaagccaaatcgttggtttaaagtacttcaatgtc
tatggaccacacgagacacacaaaggctcaatggcaagtgttgcatatcaccattacaat
cagtttaaagcacataaaaaagttaaactatttgatgcctatgatggttttgcagcaggt
cagcaaatgcgtgatttcgtttatgtcgaagatgctgccaaggttaatctatggtttttg
gatcacccacacgtctctgggatctttaactgtggcacgggcaaagcggaaccttttaac
aacatcgcccatgctgtcattgatttttacaaagaaggtcatatcgaatatatcgagttt
ccagagcatcttaagggacactatcaaagctatactgaggccaacttagacaaattgcgt
gaagcaggttgcgatgttaatttcagagatgtcaaaacgggtgttacggattacttacaa
tggcttgaaaaacataataaataa
DBGET
integrated database retrieval system
