Cysteiniphilum sp. QT6929: NYP54_02820
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Entry
NYP54_02820 CDS
T09052
Symbol
gcvPB
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase subunit GcvPB
KO
K00283
glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:
1.4.4.2
]
Organism
cys
Cysteiniphilum sp. QT6929
Pathway
cys00260
Glycine, serine and threonine metabolism
cys00630
Glyoxylate and dicarboxylate metabolism
cys00670
One carbon pool by folate
cys00785
Lipoic acid metabolism
cys01100
Metabolic pathways
cys01110
Biosynthesis of secondary metabolites
cys01200
Carbon metabolism
Module
cys_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cys00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NYP54_02820 (gcvPB)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NYP54_02820 (gcvPB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NYP54_02820 (gcvPB)
00670 One carbon pool by folate
NYP54_02820 (gcvPB)
Enzymes [BR:
cys01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NYP54_02820 (gcvPB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GcvP2_C
GDC-P
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WHN66176
LinkDB
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Position
complement(670319..671773)
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AA seq
484 aa
AA seq
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MTVSFEKSAENRRANSQKWAVSDIIHFDQKHLRDDKPLLPELGELEVLRHFTKLSQKNFS
IDTQFYPLGSCTMKYNPRIALKCAFNPSVLNIHPYQDELTQQGLLEMLYELQEILSEVTG
MDGVSLVPCAGAQGEFAGVQMIRAYHIANNEAHRNEIIVPDAAHGTNPATAVMAGCKVIE
IPTSLKTGDIDIEALKKVLGPNTAGIMLTNPSTMGVFERDIEQVAKLVHEAGGLLYYDGA
NLNAIMGKAKPGKMGFDVMHMNVHKTFATPHGGGGPGGGPIAVNKRLLPYLPVPTIVKEG
DIYRIKGKEAIPQTIGAMHAFMGNVGVLIRAYVYLKTLGGNGLTKASEIATLNANYMMAR
LKLAGFTIALPDRRASHEFIVSLAPEKKAYGINANDFAKQLLDHDMHAPTMYFPLLVPEC
LLIEPTETETREQMDQFVNAMIEIRELARTNPEKMKQAPLTQPVKRVDDVKAVRELDVVF
GQCC
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacagttagttttgaaaaatcagcggaaaaccgtagagcaaattcacaaaagtgggca
gtgtcagatattatccattttgaccaaaagcatttgcgcgatgataaacccttattacca
gaattaggtgagcttgaagtcttacgtcatttcaccaagttatcgcaaaagaacttctca
attgatacgcagttttatccattgggttcatgcacgatgaaatacaatccacgtattgcg
ttgaagtgtgcgtttaacccatcggtattaaatattcatccctatcaggatgagttgaca
cagcagggtttgttggagatgctctatgaattacaggaaatcttaagcgaagtcactggt
atggatggtgtgtcacttgtgccttgtgccggtgctcaaggtgagtttgctggagtgcag
atgatcagagcgtatcatattgctaataatgaagcgcatcgcaatgaaatcattgtgccg
gatgccgcacatggtaccaatccagctacggcagtcatggcagggtgcaaagtgattgag
atcccaacatcacttaaaaccggtgacattgatattgaggctttaaagaaagtcctagga
cctaatacggcagggattatgctaactaacccatcaacgatgggcgtatttgaacgtgat
atcgaacaggtggctaagcttgtgcatgaggcaggcgggcttttgtattatgatggtgcg
aatttaaatgcgattatgggtaaagccaaaccaggcaagatgggctttgatgtaatgcat
atgaatgttcacaaaacctttgcaacacctcatggcggtggtggaccaggaggtggacct
attgccgtgaataaacgtttattgccttatctgccagtgccaaccattgttaaagagggt
gatatctatcgcattaaaggtaaagaggctattccacaaaccattggtgcgatgcatgct
tttatgggtaatgttggcgtgttgattcgtgcttatgtttaccttaaaacattgggtggc
aatggtttaaccaaagcctcagaaatcgctacgttaaatgccaactatatgatggcacgt
ttgaagttggcaggctttaccattgcattacctgatcgtcgtgcgtcacatgagtttatc
gtctcattagcacctgagaaaaaagcttatggtattaatgccaatgattttgctaagcag
cttctagatcatgatatgcatgcgccaacgatgtattttccattgttagtgcctgaatgc
ttattgattgagccgacggagacggaaacgcgtgagcaaatggatcagtttgttaatgca
atgattgaaattcgtgagctagcgcgaacaaatcctgagaaaatgaaacaagcgccgtta
acgcaaccggtaaagcgcgttgatgatgttaaagccgtgcgcgagcttgacgttgtcttt
gggcaatgttgttaa
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