Cysteiniphilum sp. QT6929: NYP54_02975
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Entry
NYP54_02975 CDS
T09052
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cys
Cysteiniphilum sp. QT6929
Pathway
cys03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cys00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NYP54_02975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cys03021
]
NYP54_02975
03400 DNA repair and recombination proteins [BR:
cys03400
]
NYP54_02975
Enzymes [BR:
cys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NYP54_02975
Transcription machinery [BR:
cys03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NYP54_02975
DNA repair and recombination proteins [BR:
cys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NYP54_02975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
WHN66207
LinkDB
All DBs
Position
complement(709862..710815)
Genome browser
AA seq
317 aa
AA seq
DB search
MALEHLLHPTTVNNLEKNDKEAKIILEPLERGFGYTLGFSLKQILANALAGAALTRVKFN
DGDDLSVKLPTAETIEEILLNLQAIEFKLSPEHKSAEIAIKLSGKAKDIYAADLTVSEGL
EILNPDVYICQYEGKEKLSIDGQINLGVGYVAAEQAFADGWFMLDASYSPIVSCTYNVEN
ARVAQKTDLDKLILEIKTDGSLTPSEALSLAAQKIQTQMSNIVDEAELAERLYVEEEPQI
DPFLLKTVEELDLTVRSANCLKSENIRYIGELVQRTESELMKTPNFGRKSLNEIKEKLSS
YGYSLGTIVDDWPKELI
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcattagaacatttgctgcatccgacaacagtgaataatctcgagaaaaatgataaa
gaagcaaagattattttggagcctttagagcgtggttttggatacacgcttggattctca
ttaaagcagattttagctaatgcattggcaggagctgcattaacacgtgttaagttcaat
gatggtgatgatctatcggttaaactgccaacggctgaaacaattgaagagattttactt
aatttgcaagcaattgagtttaagctttcacctgagcataaatcagctgagattgcgatt
aaactttcaggtaaggcaaaagatatttatgcagcagatttaacggtttctgaaggctta
gagatcttgaatcctgatgtttatatttgccaatatgaaggtaaagaaaaactatcaatc
gacgggcaaattaatttaggtgtcggttatgttgctgcagagcaagcgtttgctgatggc
tggtttatgttagatgcgtcttattcaccgattgtaagttgcacatataatgttgaaaat
gcgcgtgttgctcaaaaaactgacttagataaattaattcttgagattaaaacagatggt
agtttaacaccgtctgaggcattgagtttggcagcacaaaaaattcaaacgcaaatgtca
aatatcgtcgatgaagcagagttagcagagcgtctgtatgttgaagaagaaccgcaaatt
gatccattcttattgaaaacagttgaagagttggatttaacggtgcgttcagcaaattgc
ttaaaatcagagaatattcgttatattggtgaattagtacagcgcaccgagtctgaactg
atgaaaacacctaactttggacgcaaatcgttaaatgaaatcaaagaaaagctttcttct
tatggttactcattaggcaccatcgttgatgattggccaaaagagttgatctaa
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