Cysteiniphilum sp. QT6929: NYP54_04060
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Entry
NYP54_04060 CDS
T09052
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cys
Cysteiniphilum sp. QT6929
Pathway
cys03030
DNA replication
cys03430
Mismatch repair
cys03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NYP54_04060 (dnaQ)
03430 Mismatch repair
NYP54_04060 (dnaQ)
03440 Homologous recombination
NYP54_04060 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cys03032
]
NYP54_04060 (dnaQ)
03400 DNA repair and recombination proteins [BR:
cys03400
]
NYP54_04060 (dnaQ)
Enzymes [BR:
cys01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NYP54_04060 (dnaQ)
DNA replication proteins [BR:
cys03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NYP54_04060 (dnaQ)
DNA repair and recombination proteins [BR:
cys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NYP54_04060 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
WHN66696
LinkDB
All DBs
Position
962160..962891
Genome browser
AA seq
243 aa
AA seq
DB search
MMRQIFLDTETTGFDFKSGHRIIEFGAVEMIDRKLTGNNLHFYFKPDIEVEAGALQVHGL
SNDFLADKPLFSDKIDDIMAYLGQSELIIHNAGFDVPFLNWELQLLSPNKWGALEQHCHI
IDSLIMAREKHPGQKNSLDALCSRYGVNNKHRTLHGALLDAEILADVYLMMTGGQLDLFS
LMTPAAEDNNNTDNLTKGHTSTSTNQALNLVDLLALKPQCDAHDDYLKLLDKKSKDQTLW
RRL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atcatgcgacaaatattcttagatactgaaaccacaggctttgactttaaatccggtcat
cgcatcattgagtttggcgctgttgaaatgatcgatcgcaaattaactggtaacaactta
cacttttacttcaagccagatattgaagttgaagcaggtgctttgcaagtccatggttta
agtaatgattttttggctgacaagcctctttttagtgacaagattgatgatatcatggca
taccttggtcagtctgaactgattattcataatgccggatttgacgtaccttttttaaat
tgggaattgcaattattatcccctaacaagtggggagcgcttgagcagcattgtcatatc
atcgacagcctaatcatggcacgtgaaaaacatcccggacagaaaaactcacttgacgca
ttgtgttcacgctatggcgtcaataacaagcatcgcacactgcatggcgcgttattggat
gctgagattcttgccgatgtttacctgatgatgaccggtggacagcttgatttatttagt
cttatgacacccgctgctgaagataataacaacacagacaatttaaccaaaggacataca
tcaacatcgacaaatcaagcgcttaacttggttgatctgctagcccttaaacctcaatgt
gacgcacatgatgattatctaaaactgctagataaaaaatcaaaagaccaaaccttatgg
cgacgtttatag
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