Cysteiniphilum sp. QT6929: NYP54_05170
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Entry
NYP54_05170 CDS
T09052
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cys
Cysteiniphilum sp. QT6929
Brite
KEGG Orthology (KO) [BR:
cys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cys03016
]
NYP54_05170 (truB)
Enzymes [BR:
cys01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NYP54_05170 (truB)
Transfer RNA biogenesis [BR:
cys03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NYP54_05170 (truB)
Prokaryotic type
NYP54_05170 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Big_13
Motif
Other DBs
NCBI-ProteinID:
WHN66617
LinkDB
All DBs
Position
1227240..1228157
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AA seq
305 aa
AA seq
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MARKRKGIALNGIIVIDKPQGLSSNHALQRVKRLFNAQKAGHTGSLDPMATGVLPICFGQ
ATRISQYLLDADKAYQATIQLGISTDSGDAEGNVIEQHQVPAFTLQNIHNALDKFRGEIS
QIPPMYSALKHQGKPLYELARQGIEIERKARNINIYALELIDYNPEKHTIDIDVRCSKGT
YIRTLGMDIAKALNCAGHLIKLTRTACGLLTMNDASSLETLQTLTLDSCHEKLLNPEYAF
TDTPIFTIPNDKVDLFYLKGKMQLTNNFTGSARIYDQDRFVALGHFNDGELVKKQLFLQG
IIENE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtaaacgcaaaggaattgccttaaatggcattatcgtgattgataaaccacaa
ggcttatcctccaatcacgcactacaacgtgttaagcgcctttttaatgcacaaaaagcc
ggacatacaggcagccttgatccaatggcaacgggcgtgttacccatttgctttggtcaa
gcaacacgtatatcacaatatctattagatgctgacaaggcttatcaagcaacgattcag
ttaggaatcagtactgatagtggtgacgctgaaggtaatgttattgagcagcaccaagtc
cctgcattcacccttcaaaacatccataacgcattggataaattccgtggtgagataagt
cagatcccaccgatgtattcagcgctcaagcatcaaggaaaacccttgtatgagttagca
cgtcaaggcattgagatcgagcgcaaagcgcgtaatatcaacatttacgcacttgagttg
attgactataatcctgaaaagcacacgattgacattgatgtgcgctgctccaagggaacc
tatattcgcacgctgggcatggatattgccaaagcgctaaactgcgctggacatttaatt
aaattaacacgaaccgcatgcggactattgacgatgaatgatgcatcatcgcttgagaca
ctgcagacactcacactggattcatgccatgaaaagctacttaatccagaatatgcattt
acagatacacctatttttactatacctaatgacaaagtggacttattttatctgaaagga
aagatgcaactaactaacaatttcaccggcagcgcccgtatttatgatcaagatcgattt
gtcgcacttggtcactttaatgatggcgagcttgtgaaaaaacaactttttttacaaggc
atcatcgagaatgagtaa
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