Cysteiniphilum sp. QT6929: NYP54_09260
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Entry
NYP54_09260 CDS
T09052
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cys
Cysteiniphilum sp. QT6929
Brite
KEGG Orthology (KO) [BR:
cys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cys03032
]
NYP54_09260 (gyrB)
03400 DNA repair and recombination proteins [BR:
cys03400
]
NYP54_09260 (gyrB)
Enzymes [BR:
cys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NYP54_09260 (gyrB)
DNA replication proteins [BR:
cys03032
]
Prokaryotic type
DNA Topoisomerases
NYP54_09260 (gyrB)
DNA repair and recombination proteins [BR:
cys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NYP54_09260 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WHN65224
LinkDB
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Position
2126366..2128783
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AA seq
805 aa
AA seq
DB search
MSDVKTYDSSNIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGFCDD
IIVTMHTDGSVSVSDNGRGIPVDIHPEEGRSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSESLELRVWKNGKEYQQFYAHGEPLAPLKEIGDTTKQGTMIRFKPSPQTFSI
VEFSYEILAKRIRELSFLNSGVKVQLIDKINDQQVTFQYEGGISAFVEHLNKSKTPLNQN
IISIQGERSGVVVELAMQWNESYQENVYCFTNNIPQRDGGTHLSGFRAALTRTVNGYIES
EGLNKKLKISTSGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKTAVEALVNEKLQE
FLLENPNEAKLIANKIIDSARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE
LYIVEGDSAGGSAKQARDRRTQAILPLKGKILNVEKARFDKMLSSQEVGTLIKALGCGIG
RDEYDPNKTRYHRIVIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVKR
GKQETYLKDDAALAQYLGSIGIEGASLFPGDNIPPISGVGLENLYQQYQKTSAKITTLSR
RYPVNALKALVSYAPYPATEDESALSTWWQGFAEHANKLSGGYEFYTTAIHSEQHEDEKV
TKLRLLRLLHGVNTEYSFNLSFFESKDYQSIVELGVALNGLLTKAAYVERGSKKEFVDTF
EQAMEWLIAEAKRGQNVQRYKGLGEMNPEQLWETTMDPAERRMLQVTIADAVAADELFST
LMGDDVEPRRDFIESNALNVVNIDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgttaaaacttatgattcgtcaaatattaaggtattaaaagggcttgaggcg
gtacgtaaacgcccaggtatgtatattggggatacggatgatggctcaggtcttcatcat
atggtatttgaggttgttgataactccatcgatgaggcgttagcaggattctgtgatgat
attattgtgaccatgcatactgatggttcggtgtcagtcagtgataatggtcgagggatt
cctgttgatatccatccagaagaaggacgttcagcagcggaagtcattatgacggtactg
catgctgggggcaaatttgatgataactcgtataaagtatcaggtggtttgcatggtgtt
ggtgtgtcagtggttaatgcgttgtctgaaagtcttgagttgcgtgtttggaaaaatggc
aaagagtatcaacaattctatgctcatggtgagccattagcaccgttaaaagaaataggt
gataccaccaagcaagggacaatgattcgctttaagccatcacctcaaactttttcaatt
gtggagtttagttatgaaattttagcaaagcgtattcgtgagctatcatttttaaactca
ggtgttaaggttcaactgattgataagatcaatgaccagcaagttactttccaatatgaa
ggtggtattagtgcattcgttgagcatttaaataaaagcaaaacaccgttgaatcaaaat
atcattagtattcaaggtgaacgcagtggcgttgtcgttgagttggcaatgcaatggaat
gagtcctatcaagaaaacgtctattgttttacgaataatattccacaacgagatggtggt
acgcatctatcgggctttagagcagcgttaacacgtacggttaatggttatattgagtca
gaaggcttaaataaaaagcttaaaatcagcacatcaggtgatgatgcgcgcgaaggctta
actgccgtgctatcggtgaaagtacccgatcctaaattctcatcacaaactaaggataag
ctcgtttcctctgaagtgaaaaccgctgttgaagcattggtgaatgagaagcttcaagag
tttttacttgagaatccaaatgaagcaaagctgattgccaataagattatcgactcagcg
cgcgctagagaagcggcaagaaaagcgcgtgaaatgacacgcagaaaaggtgctttggat
attgccggcttacccggcaagcttgctgattgtcaggaaaaagatccggcattatccgag
ctttatatcgtggagggagactccgcgggtggttcagccaagcaggcacgtgaccgtaga
acgcaggctattttgccattgaaaggcaagatcttaaacgttgaaaaagcgcggtttgat
aagatgctaagctcgcaagaagtcggcacgttaatcaaagccttggggtgtggtattgga
cgtgatgagtatgatcctaataaaacaaggtatcaccgtattgttattatgacggatgct
gatgttgatggttcacacattcggacgttacttttgactttcttttatcgtcaaatgcct
gagcttattgagcgcggttatatctatattgcacaaccgccattgtataaggtcaagcgc
ggcaagcaggaaacatatctcaaagatgatgccgctttagcgcaatacttaggaagtatc
ggtattgagggcgcgtcgttattcccaggggacaacatcccacctatctcaggtgttggt
ttggagaatttgtatcagcaatatcaaaaaaccagtgcgaaaatcactactttatcacgg
cgctatccagtcaatgcacttaaagcacttgttagctatgcgccatatcctgcaacagaa
gatgaatcagcgttaagcacttggtggcaaggctttgctgagcatgccaacaagctctct
ggcggttatgaattttacacaacagctattcatagcgaacagcatgaagatgagaaagtc
actaaacttagactcttgcgtttattgcatggtgtaaatactgaatatagctttaacttg
agcttttttgaaagcaaagactatcaaagcattgttgaactgggtgtcgcactcaatggt
cttttaaccaaagccgcatatgtcgagcgaggaagcaaaaaagagtttgttgatacgttt
gagcaagcaatggagtggttaatcgcagaagccaagcgtgggcagaatgtacagcgctat
aagggtcttggtgagatgaacccagagcaattatgggagacaacaatggatcctgctgag
cgtcgtatgctgcaagtgaccattgcggatgctgtcgctgctgatgagttattctcaacg
ctgatgggtgatgatgttgaacctagacgcgactttattgaaagtaatgcgcttaatgtc
gtgaatattgatgtttga
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