Crocosphaera subtropica: cce_0601
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Entry
cce_0601 CDS
T00686
Symbol
sigE
Name
(GenBank) group 2 sigma-70 RNA polymerase sigma factor E
KO
K03086
RNA polymerase primary sigma factor
Organism
cyt
Crocosphaera subtropica
Brite
KEGG Orthology (KO) [BR:
cyt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
cce_0601 (sigE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyt03021
]
cce_0601 (sigE)
Transcription machinery [BR:
cyt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
cce_0601 (sigE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
HTH_Tnp_1
LexA_DNA_bind
CMD
DUF2229
ARM_TT21_4th
Motif
Other DBs
NCBI-ProteinID:
ACB49952
UniProt:
B1WQ30
LinkDB
All DBs
Position
602300..603424
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AA seq
374 aa
AA seq
DB search
MNTTQMMQTESNNEFNPSQIETVEFEQTEHELQSVEVEISSLSDELGNQYPEGYRKTVSD
DTVGAFFKEMSRYPLLNAEEEVELAHHVQFLVQAEETRQQLQEALQHSPSKAEWAKAMGF
ETQKQFEHRLHRGRTAKRKMIRSNLRLVVSIAKRYLNRGVPFLDLIQEGAIGLNRAAEKF
DPNKGYKFSTYAYWWIRQAITRTIANDARTIRLPIHVVEKLNKLKKAQRVLKQKLQRNPN
EKELADELEVSPSQLRQLLQLRRQSLSLNHRVGKGEDTELVDLLEDQDLQLPEELMNEGM
LRYEVSAVLSDVLTQREKDVISLRYGLCTSQPHTLEEVGGIFNLSRERVRQIQSKAMRKL
RRPQVARRLKGWLH
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgacacaaatgatgcaaacggaatccaacaatgaattcaacccttctcaaatc
gaaacagtggaatttgaacaaacggaacatgaattgcaatctgtcgaagtagaaatttcc
tctttatctgatgagttaggtaatcaatatccagagggatatcgtaaaacggtttcagat
gatacagttggggcattttttaaagaaatgtctcgctatcccctgttaaatgcagaagag
gaggtggagttagcccatcatgttcaatttttagtgcaagcagaagaaaccagacaacaa
ctccaagaagcgttgcaacattcccccagtaaagcagaatgggctaaagcgatggggttt
gagacgcaaaagcaatttgaacatcgtttgcatcggggacggacggctaaacggaaaatg
attcgttctaatttgcgcttagtggtatccattgctaaacgttatcttaatcgtggtgtt
ccttttctggatttaattcaagaaggggcgatcggtttaaatcgcgcagccgaaaaattt
gaccccaacaaaggctataaattctcaacctatgcttattggtggattcgtcaggcgatc
actagaaccatcgccaatgatgcaagaaccattcgtttaccgattcatgttgtcgaaaaa
ttaaacaaactcaaaaaagcccaacgggttcttaaacaaaaattacaacgcaaccctaat
gaaaaagaactggcagatgagttagaagtgagtccttctcaactgcgtcaattattgcaa
ctccgtcgacaatctttgtctttaaatcatcgggttggtaaaggagaagacaccgaatta
gtagatttgcttgaagatcaagacttacaactccctgaagaactgatgaatgagggaatg
ttacgttatgaagtctcagcagtattaagtgatgtcttaacccaacgggaaaaggatgtt
atttctttgcgttacgggttatgcacttctcaacctcacaccttagaagaagtaggggga
atttttaacctttctcgtgaaagagttcgtcaaattcaaagtaaagccatgcggaagtta
cgtcggcctcaagtggcccgtcgtttgaaaggatggcttcattga
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