Crocosphaera subtropica: cce_2425
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Entry
cce_2425 CDS
T00686
Symbol
recJ2
Name
(GenBank) single-strand-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cyt
Crocosphaera subtropica
Pathway
cyt03410
Base excision repair
cyt03430
Mismatch repair
cyt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
cce_2425 (recJ2)
03430 Mismatch repair
cce_2425 (recJ2)
03440 Homologous recombination
cce_2425 (recJ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyt03400
]
cce_2425 (recJ2)
DNA repair and recombination proteins [BR:
cyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
cce_2425 (recJ2)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
cce_2425 (recJ2)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
cce_2425 (recJ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
HTH_11
DUF5771
Motif
Other DBs
NCBI-ProteinID:
ACB51773
UniProt:
B1WRC4
LinkDB
All DBs
Position
2477063..2479408
Genome browser
AA seq
781 aa
AA seq
DB search
MNTIHSQWEVLPIVSLPAWFLDIVNSYCTDSQGIYAAQLLWHRGIQTPEELQGFLDANYY
YPLSPFEFGCEMKLATKRLEVAMNNQEKVTIWGDFDADGITATSVLWEGLGQFFIPHLQL
NYYIPNRATESHGLNIPGIKKLADEGTKLIVTCDTGSTNIEEINYANSLEIDIIVTDHHT
LPNDRPNVVSIINPRYFYEDHPLFSLSGVAVAYKLVEALYLSFPEIPESPLENLLDLVAI
GLIADLVELKGDCRYLAQQGLKKLQQQLKNTTRPGVAHLLNLCKRGGDRPTDISFGIGPR
INAISRIQGDAHFAVELLTSKDEERCKELAFETELANTRRKSLQKDIKKNVEKKLQMLDL
STTQVIVLEDPQWQSGVLGLVAGQIAQEYGRPTILLTTAETEKMSESDLKLARGSARSVY
NIDLYKLVASQRDLLHKFGGHPFAAGLSLPVENLSLFRENINRKLRQEIIDLNTLSSTIQ
ADLVVTVSQLGQSLFRELKLLEPYGMGNPVPRLLIQNCWFEALGNQNIRDAKNNKIKYIK
TKFDIYDNSVDEGFPGIWWEHYQEELPQGKNKRCDAIVELDYNTYGKGRYEVRLIEVRES
LKTHEYQSIKTNQITLIDYRNQDQVNESYLELEQLSSCPVSWDELYKKYQTSINNQHDLA
LNYSYDEQFNPSEMIKQLIGIAKYLNRTQKTITKEQLKEKLLLSDRTLNLALEFLEKIGF
LIIQEDQTIQIETTTHLSQEYYLSQKKLIDTLQEEHFKRKYFTQVPVETLQQLLVSESLN
Y
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaatactatacactctcagtgggaagttttaccgattgtttctttacctgcttggttt
ctggatattgttaatagttattgtactgattctcagggaatttatgcagcccaattatta
tggcatagaggaattcaaactccagaagaattacaaggttttttagatgcgaactattat
tatccgttgagtccttttgaatttggttgtgaaatgaaattagcaactaaacgcctagaa
gttgctatgaataatcaagaaaaagtaactatttggggagatttcgatgcggatggaatt
acagccaccagtgttttatgggaaggacttggacaattttttattcctcatctccaactt
aattattatataccgaatcgtgccacagagtctcatggattaaatattccaggcattaaa
aagttagcagacgaagggacaaaactgattgtaacctgtgacacaggaagcactaatata
gaggaaattaattatgctaattctctagagattgatattattgttactgatcatcatacc
ttacccaatgatcggcctaatgtggtttctattattaatcctcgttatttttatgaagat
catccattattttctttatcaggagttgccgtagcttataaattagttgaagccttatat
ttaagctttccagaaattcccgaaagtcctttagaaaatttattagatttagtggcgatt
ggtttaattgctgatttagttgaattaaaaggagactgtcgttatttagcacagcaaggg
ttaaaaaagctccagcaacaacttaaaaataccacccgtcctggcgttgctcatttacta
aatttatgcaagagaggaggcgatcgcccgacggatatttctttcggtattggtcctaga
attaatgccattagtcgtatacaaggggatgctcattttgctgtagaattattaaccagt
aaagatgaagaacgttgtaaggaactggcttttgagacggaattagccaatacccgtcgt
aagtctttacagaaagatattaagaaaaatgttgagaaaaaactacaaatgttagactta
tctaccactcaagttattgttttagaagatccgcaatggcaaagtggtgtattaggatta
gttgcgggccaaattgctcaagagtacggtcgtccgactattttattgacaacggctgaa
accgaaaaaatgagtgaaagtgatctaaaactagctagagggtcagcccgttcggtttat
aatattgatctgtataagttagtcgcttctcaacgagatttattacataaattcggaggt
catccctttgcagcagggttgagtttaccggtagaaaatttatctttgttcagagaaaat
atcaatcgaaagctgagacaagaaattatagaccttaatacattaagttctaccattcaa
gctgatttagtcgtcacagtttctcaactgggtcaaagtttatttagagaattaaaatta
ttagaaccctatggaatgggaaatcctgtccctaggttattgattcaaaattgttggttt
gaagcgttagggaatcaaaatattagagatgctaaaaataataaaattaaatacataaaa
actaagtttgatatttatgataattccgttgatgaggggtttcctggtatttggtgggaa
cattatcaagaagaattaccccaaggcaaaaataagcgatgtgatgctatagttgaactg
gattataatacctatggaaagggacgttatgaagtgcgtttaattgaagttagagaaagt
ttaaagactcacgaatatcaatcaataaaaaccaatcaaattactttgatcgattataga
aatcaagatcaagttaatgagagttatttagaattagaacaattaagtagttgtcctgtg
agttgggatgaattatataaaaagtaccaaacaagtattaataatcaacatgatttagcg
ttgaactactcctatgatgagcaatttaatccatcagaaatgattaaacaattaatcggt
attgctaaatatctgaaccgaactcagaaaacgataacaaaagaacaattaaaagaaaaa
ttattattaagcgatcgcaccctaaatttagccttggaatttttagagaaaattgggttt
ttaatcatccaagaggatcaaactattcagatcgaaacaacaacccatttatcacaagag
tattacctctcacagaaaaaattaatagatactctccaagaagaacattttaaaagaaaa
tactttactcaagttcctgtcgaaaccttacaacagttattagtgtctgaaagtttaaat
tattaa
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