Crocosphaera subtropica: cce_3346
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Entry
cce_3346 CDS
T00686
Symbol
rnb
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cyt
Crocosphaera subtropica
Brite
KEGG Orthology (KO) [BR:
cyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyt03016
]
cce_3346 (rnb)
Enzymes [BR:
cyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
cce_3346 (rnb)
Transfer RNA biogenesis [BR:
cyt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
cce_3346 (rnb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ACB52694
UniProt:
B1WYB0
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Position
complement(3450983..3452995)
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AA seq
670 aa
AA seq
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MEKGKLVEFRVNGEPRLGVVDRPEGKKDWIVIDSEGHSHKLRPQRVDYEVPGGSYSNSDI
PQFLKEIQAYIDPSSLEVAWELLVEDGKALTPADMASFLYSEQTPQLCYAAHRLLSEDKI
YFKKKGENYEPRSPSQVAEIKHQLEVEQQRQQEKEIFFDHIQQALAGETVEWSQSDRTRL
ELLEKFVLQPEQNHRNAQDLLKELGQGTTAEAAFDLLVALKWWSPNENLFLKRSSYPLNF
PQKVLDVASSYLQTLPPDADSDRLDLTHLKVYTIDDESTEEIDDGLSVEYLDDDRVKLWI
HIADPTRLVTPGDELDLEARKRSTTLYLPTGMISMFPVELATGPMSLRQGKLCAALSFGV
ILDSHGAILDYSIHASLIKPTYRLTYHDVDEMLQLGITAESELAVLAEAAKKRHQWRQSQ
GSITIKMPEAIIKVKSEEEIIIELLETSISRQLVAEMMILAGEVAGNYCREHGIPVPFRG
QPQPELPSEEELLLLPPGPVRACALRRCMPRSEMGTLPSRHASLGLDNYTQVTSPIRRYT
DLLTHFQLKAHLRGDKLPFPLDVMQQILYSVTLSAQEASLVERQTNRYWGLEFLRRNADQ
VWQGLVLRWLREDEGLGVILLEELGLELPHRFERSVSLGDRLNVQVSRADPHRDEIRFRE
MLEHETIINN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaggtaagttagttgaatttagagtcaatggagaaccccgtctaggggtggtt
gatcgtccagaaggtaaaaaagattggatagtgattgacagtgaaggtcattcccataaa
ctacgaccccaaagggtagattacgaagtgccaggggggtcttacagtaatagcgatatt
cctcagtttctcaaagagattcaagcctatattgacccatcgagtttagaagtggcgtgg
gaattattagtagaagatggaaaagcgctgacaccagcagatatggccagctttctctat
tctgagcaaacaccacagttatgttatgctgctcatcgcttgttatctgaagacaaaata
tattttaagaaaaaaggtgaaaattacgaacctcgttcccccagtcaagtcgcagaaatt
aaacatcaactcgaagtagaacaacaacgtcaacaagaaaaagaaatctttttcgaccat
attcaacaagctctagccggggaaacggtagaatggagtcagagcgatcgcactcggtta
gaattattagaaaagtttgtcttacaaccagagcaaaatcatcgtaacgctcaagactta
ctcaaagaactgggacagggaactactgctgaggctgcttttgatttactggtagcctta
aaatggtggagtcccaacgaaaaccttttcttaaagcgaagctcttatccgctaaatttt
cctcaaaaggtattagatgtggcctcttcttacttacaaactttgccccccgacgctgat
agcgatcgcctggacttgacccatctaaaagtgtataccattgatgatgaaagtaccgaa
gaaattgatgatggcctgagcgtagagtatttagacgatgatagagtcaagttatggata
catatcgctgatcccactcgtttggttaccccaggggatgagttagatttagaagcgaga
aaacgtagcaccaccctctatttacccacaggtatgatttccatgtttcctgtggagtta
gccacaggcccaatgagtttacgtcaagggaaactttgcgctgctttgagttttggggtg
attttagatagtcacggagccattttagattattctatccatgccagtctcattaaaccc
acctatcgcctcacctaccacgatgtcgatgaaatgttacagttaggcattaccgccgag
tcagaattagcggtgttagcagaagcagctaaaaaacgacatcagtggcgacagtctcaa
gggtccatcaccatcaaaatgccagaagccattattaaggtgaagtcagaagaagaaatt
attattgaattattagaaacctccatttcccgtcaattagtagcagaaatgatgattttg
gccggagaagtagcaggaaattattgtcgagaacatggaatacctgttccctttcgggga
caacctcaaccagagttaccctcagaagaagagttactcttattacccccaggcccagtt
agagcttgtgcgttgcgccgttgtatgcctcgcagcgagatgggaaccctacccagtcgg
cacgctagtttaggattagataattatacccaagtaacctccccgattcgtcgttatacg
gatttattgacccattttcagctaaaagctcatctgagaggagataagttgccttttccc
ttggatgttatgcaacaaattttatatagtgtcaccctctcagcgcaagaagcgtcttta
gtggaaagacagacaaaccgttattgggggttagaatttttacgtcgtaacgccgatcag
gtttggcaagggttggttttacggtggttaagggaagatgaagggttaggggtgatcctc
ttagaagaattagggttagaattacctcatcgctttgaacgatcggtatctttaggcgat
cgcctcaatgtacaggtgagtcgtgctgatccccatcgggacgaaattcgttttcgtgag
atgcttgaacacgaaactatcattaacaattga
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