Crocosphaera subtropica: cce_3586
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Entry
cce_3586 CDS
T00686
Symbol
sigJ
Name
(GenBank) group 3 sigma-70 RNA polymerase sigma factor J
KO
K03090
RNA polymerase sigma-B factor
Organism
cyt
Crocosphaera subtropica
Brite
KEGG Orthology (KO) [BR:
cyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyt03021
]
cce_3586 (sigJ)
Transcription machinery [BR:
cyt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
cce_3586 (sigJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_r3
AbiEi_4
HTH_23
HTH_24
Sigma70_ECF
HTH_8
HTH_10
HTH_Crp_2
HTH_28
HTH_30
HTH_1
Motif
Other DBs
NCBI-ProteinID:
ACB52934
UniProt:
B1X0P5
LinkDB
All DBs
Position
3714874..3715722
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AA seq
282 aa
AA seq
DB search
MQSALTSFLIILPFKNHFGCKTMTHYNQSTKKKYIDSMELLSAYARNPSLELRNQLVERN
LGLVRQVAHRISRQCSEPYEDLEQIGYLGLIRAIERFDPQQGCAFSSFAIPYIRGEMLHY
LRDKGSVMRIPRRWQELYNKAKKIRKQLTVSLKRPPSDWEIADALGVPLEEWNECQLALQ
NRLLVSLDATISHNVDCSISFGDTLPDQEYQAKQKLEEDRLQLQRALGQLEEKTKAAIEC
VFLHELPRKEAAKQIGISPMTVTRHLKKGIQQLGSLLEPQVA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagcactgacctccttccttattattttgccatttaagaaccattttggatgt
aaaactatgacccactataatcaatcaactaagaaaaaatatatagatagcatggagctt
ttaagtgcttatgctcgtaatccttctttggaattacgcaatcaattagtagaacgtaat
ttagggttagtgcgtcaagtggctcatcggattagtcggcaatgttcagaaccctacgaa
gatttagaacaaattggttatttagggttgattcgtgccattgaacgctttgatcctcag
cagggttgcgcttttagttcctttgctatcccctatattcggggagaaatgcttcattat
cttcgtgataaagggagtgtcatgagaattcctagacgttggcaagaactatacaataaa
gcgaaaaaaatacgcaaacaattaaccgttagtctcaaacgcccccctagtgattgggaa
attgctgatgctttaggggttcccttagaggagtggaatgagtgtcaactggctttgcaa
aaccgtcttttagtgagtttagatgcaaccattagtcataatgtggattgttccattagt
tttggagatactttaccggatcaagagtatcaagcaaaacaaaaattagaagaagatcgt
ctgcaattacaacgggcactaggtcaactggaagaaaaaaccaaggcggctattgaatgt
gtctttttacatgaacttcctcgcaaggaagcagctaaacaaatcggtattagtcccatg
acagtcacacgccatctcaaaaaagggattcaacagttgggatcgctgttagaaccccaa
gtggcttaa
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