Crocosphaera subtropica: cce_3987
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Entry
cce_3987 CDS
T00686
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cyt
Crocosphaera subtropica
Pathway
cyt03420
Nucleotide excision repair
cyt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
cce_3987 (pcrA)
03430 Mismatch repair
cce_3987 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyt03400
]
cce_3987 (pcrA)
Enzymes [BR:
cyt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
cce_3987 (pcrA)
DNA repair and recombination proteins [BR:
cyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
cce_3987 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
cce_3987 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
DEAD
AAA_30
ResIII
AAA_11
DUF1978
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ACB53335
UniProt:
B1WQ20
LinkDB
All DBs
Position
complement(4119998..4122316)
Genome browser
AA seq
772 aa
AA seq
DB search
MTASVNFLSQLNPSQRIAVEHFCGPLLVVAGAGSGKTRALTYRIAHLITHYQVDPESILA
VTFTNKAAREMKDRLERLFAQEMALKHHGQPFNSLSEYDQKRLLSQVYKKTTKKLWIGTF
HSLCARILRYDINKYQDERKRTWERNFSIFDESDVQSLVKNIVLKQFNLDDKKFNPRNVR
YTISNAKNLGLSPEAYLKEHSYAKGRIIAEVYQEYQNQLAANNALDFDDLILIPVRLFQQ
NESILGYWHSQFKHILVDEYQDTNRIQYELIQLLTTNGELQKSEYNWQNRSIFVVGDADQ
SIYSFRMADFTILLNFQSDFGDGLPDEDTRTMVKLEENYRSTETILQAANKLIENNSQRI
DKILRPTRGEGEEIYCYQAEDERIEADFVISKIQELVETNPELNWGDFALLYRVNAQSRP
FEDNLIRNNIPYTIVGGFKFYDRQEIKDSLAYLRLIINPFDTVSLLRVINSPRRGIGKTS
VDSLLKAAQELEIPLWEIISDETSVKTLAGRAAKSVNKFATMIKELQGKLKELSATELFD
QVMELSGYVHELKQKGTEEADNRLENIYELYSAIAQYQEDSEDTSLQGYLTNASLASDLD
NLDEGQEKVSLMTLHSAKGLEFPIVFLVGLEQGTLPHIRSLNDPLSLEEERRLCYVGLTR
AQEQLFITHARERYVWGSKEIKTASQFLQEIPQDLINSNLRPTVRKIYHKKPASSQNNIK
WSVGDRVIHHSFGEGEITHVLGSGKKTNLAIKFAGLGRKIVDPRTNSITKID
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgacagcttctgttaactttctttctcaacttaatccctcacaacgtatcgctgttgaa
catttctgtggtcctctgttagtagttgcaggggctggttcaggcaaaactcgcgctctc
acctatagaattgcacacttgattacccattaccaagttgatcctgagtctattctagcg
gtaacttttaccaataaggcggcgcgagagatgaaagatagacttgagcggttatttgct
caagaaatggctttaaaacatcatggccaaccgtttaattctctctcggaatacgatcaa
aaacggttactttctcaagtttataagaaaactactaaaaagttatggattggtactttt
catagtttatgcgctagaattcttcgctacgatattaataaatatcaagatgaaagaaag
cggacatgggagcgtaatttttcgatttttgatgaatctgatgtacaaagtttagttaaa
aatattgttctcaaacagtttaatttagacgataaaaaatttaaccctcgtaatgttcgt
tataccatcagtaatgctaaaaatttagggttatctcctgaggcttatttaaaagaacat
tcctatgcaaaaggtcgtattatagccgaagtttatcaggaatatcaaaatcaattagct
gctaataatgctctggattttgatgatttgattttaattcctgttcgtttgtttcagcaa
aatgagtctattttgggctattggcattctcaatttaaacatattttagtggatgaatat
caagatactaaccgtattcaatatgagttaattcaactattaacgaccaatggagaacta
caaaaaagtgaatataattggcaaaatcgctccatttttgtggtaggagatgccgatcaa
tccatttatagttttcgcatggcagactttactattttactcaattttcaatcagacttt
ggggatggtttgcccgatgaagatacgagaacaatggtcaaattagaagaaaattatcgc
tcaacggaaactattttacaagcagctaataaactgattgaaaataatagtcaacgtatt
gataaaattttgcgtcctactaggggagaaggagaagaaatttattgttatcaagcagaa
gatgaacgcatagaagcagattttgttattagtaaaattcaagaattagtagagactaac
ccagaattaaattggggagattttgccctattgtaccgtgtcaatgctcaatctcgaccc
tttgaagataacttgattcgtaataacattccctatacaattgtcggaggatttaagttt
tatgatcgtcaagaaattaaagattcacttgcctatttacggttaattattaatcccttt
gataccgttagtttactgagagtgattaattctccccgtcgaggaattggtaaaacatcg
gttgattcactcctcaaagcagcccaagaattagaaatacctttatgggaaattattagt
gatgaaacatcggttaaaaccttagccggaagggcagcaaaatctgttaataagtttgcc
actatgattaaagaattacaaggtaaattgaaagaactttcagcaactgaactctttgat
caagtgatggaactatccggatatgtccatgagttaaaacaaaaaggaaccgaagaagct
gataatagactggaaaatatttatgaattgtacagtgcgatcgctcaatatcaagaagac
agtgaagacaccagtttacaaggttatttaactaatgcgtccctggcctcggatttagat
aacctggatgaagggcaagaaaaagtctctttaatgaccttacactctgccaaaggttta
gaatttcccattgtcttcttagtaggattagaacaaggaactttaccccatatccgtagt
ttaaacgatcctttatccttagaagaagaacgaagattatgttatgttggcttaactcgc
gcccaagaacaactatttattacccacgccagagaacgatatgtttgggggtcgaaagaa
atcaaaacagcctcacaatttttacaagaaattccccaagacttaatcaatagtaatctt
cgcccaaccgtcagaaaaatttaccacaagaaaccagcttctagccaaaataatataaaa
tggtctgtcggcgatcgtgtcattcatcatagttttggcgaaggggaaattacccacgtc
ttaggatcaggaaaaaaaaccaacttagccattaaatttgcaggactgggtcgtaaaatt
gttgatccgagaaccaactccattactaaaattgactaa
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