Crocosphaera subtropica: cce_4001
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Entry
cce_4001 CDS
T00686
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
cyt
Crocosphaera subtropica
Brite
KEGG Orthology (KO) [BR:
cyt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyt03400
]
cce_4001
DNA repair and recombination proteins [BR:
cyt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
cce_4001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_16
AAA_22
ABC_tran
ATPase_2
Lon_C
nSTAND3
GvpD_P-loop
AAA
AAA_14
NTPase_1
AAA_24
DUF7125
SLFN-g3_helicase
MCM
GvpD_bR2
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ACB53349
UniProt:
B1WQP7
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Position
complement(4134701..4136263)
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AA seq
520 aa
AA seq
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MAKTRTIYICSACGAESVQWFGKCEACQAYGTLEEQMVSTSNSPVGVARGGWQSNARTDY
RPNVAPKPRISVSFNDITEEEQARFQSGYGELDRVLGGGVVPGSLVLIGGDPGIGKSTLL
LQTANQLSQRLPRILYVSAEESGQQIKLRASRLGVAEASSVTESKTAENNGKNGNGKVAK
KKEDDPDKANLFILPETDLEEILRELESLQPQVAIIDSIQTLYFAALTSAPGSVAQVREC
TSALMQVAKRDNITLFIVGHVTKEGAIAGPRVLEHLVDTVLYFEGDRYASHRLLRSVKNR
FGATHEIGIFEMAEHGLVEVENPSELFLGNRDEFVPGTATVVACEGTRPIVVELQALVSP
TSYASPRRSTTGVEYSRLQQILAVLEKRVGIPLSKLDAYVASAGGLGVEEPAADLGVAIA
VVASFRDRVVDPRTVLIGEVGLGGQVRLVAQMELRLKEAAKLGFKRAIVPKGQSFADDIG
IEIVPVGKVIDAIIAAIPPQQKFGKDLEDLRDEEIEDENF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaacacgaacaatttacatttgtagtgcttgtggggccgagtcggttcagtgg
tttggtaagtgtgaggcttgtcaggcctatggaactctagaagagcaaatggtaagcacc
tccaattcccctgtgggagttgctagagggggttggcaatcgaatgcccgaacggattat
cgtcctaatgttgccccaaaacctcgcatttctgtctcttttaacgatattacagaagaa
gaacaagcccgctttcaatctggttatggagagttagaccgagtgttagggggaggtgtg
gttcctggttcgttggttttaattgggggagatcccggcattggtaaatcaacgttatta
ttacaaactgctaaccaattatcccaaagattaccccgtattttatacgtttcagcagaa
gaatcgggccagcaaattaagttaagggcttctcgtttaggagtggcagaagccagcagt
gttacggaatctaaaacagcagaaaataatggtaaaaatgggaacggcaaagttgctaaa
aagaaagaagacgacccagataaagcgaatctttttattctccctgaaacagacttagaa
gagattttaagggaattagaatctctacaaccccaagtggccattattgatagtattcaa
accctatactttgctgccttgacctctgcgccgggttcggtggcccaggttagagaatgt
acctcagctttaatgcaggtagctaaacgggataatattaccctctttattgtcggtcat
gtcaccaaagaaggggcgatcgcagggcccagggtgttagaacatttagtggacacggta
ctgtattttgaaggcgatcgctatgcgtctcatcgtctcttaaggtcggttaaaaatcgt
tttggggcgacccacgaaatcggtatttttgaaatggctgaacatgggttagtggaagta
gagaacccctcagaattatttttaggcaaccgagatgagtttgtccccggaaccgctact
gttgtcgcttgtgaaggaacccgacccattgtggtggagttacaagcgttagtcagtccc
actagctatgcgtcccctcgtcgttctactacgggagtggaatacagtcgcttacagcaa
attttagcggtgttagagaaacgggtggggatacctttatctaaattagacgcttatgtg
gcttctgcggggggtttaggggtagaagaaccggccgctgatttaggggtggccatcgct
gttgtggctagttttagggatagggtagtggaccccagaaccgtattaattggagaagtg
gggttagggggacaagttcggttagtggcgcaaatggaattacggttaaaagaagcggct
aagttaggatttaaacgggcgatcgttcccaaaggacagagttttgctgatgatattggc
atagaaattgtaccagtgggtaaggtgattgatgccattattgcggctattcctccccaa
caaaagtttggtaaagatttagaggatttgagggatgaggaaattgaagatgagaatttt
taa
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