Crocosphaera subtropica: cce_5034
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Entry
cce_5034 CDS
T00686
Symbol
xseB
Name
(GenBank) putative exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
cyt
Crocosphaera subtropica
Pathway
cyt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cyt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
cce_5034 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyt03400
]
cce_5034 (xseB)
Enzymes [BR:
cyt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
cce_5034 (xseB)
DNA repair and recombination proteins [BR:
cyt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
cce_5034 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF7277
DUF4253
Motif
Other DBs
NCBI-ProteinID:
ACB54380
UniProt:
B1X2L9
LinkDB
All DBs
Position
linear:complement(270541..270768)
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AA seq
75 aa
AA seq
DB search
MDSTSAPNDWNYETAISSVEEMINKIESGNLPLETVFEEFELAVEQVNQCEQFLNQGMEK
MELLIETLEDFEEEF
NT seq
228 nt
NT seq
+upstream
nt +downstream
nt
atggactctaccagcgcacccaatgattggaattatgaaacagcaatttcctctgtagaa
gaaatgatcaacaaaatagaatcagggaatttacctttagaaaccgtttttgaagagttt
gaactagctgtagaacaagtcaatcaatgtgagcaatttcttaaccaggggatggaaaaa
atggaattactaatagaaaccctagaagattttgaagaagaattttga
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