Candidatus Atelocyanobacterium thalassa: UCYN_00480
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Entry
UCYN_00480 CDS
T01159
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cyu
Candidatus Atelocyanobacterium thalassa
Pathway
cyu00260
Glycine, serine and threonine metabolism
cyu00460
Cyanoamino acid metabolism
cyu00630
Glyoxylate and dicarboxylate metabolism
cyu00670
One carbon pool by folate
cyu00680
Methane metabolism
cyu01100
Metabolic pathways
cyu01110
Biosynthesis of secondary metabolites
cyu01120
Microbial metabolism in diverse environments
cyu01200
Carbon metabolism
cyu01230
Biosynthesis of amino acids
cyu01240
Biosynthesis of cofactors
cyu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cyu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
UCYN_00480
09102 Energy metabolism
00680 Methane metabolism
UCYN_00480
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
UCYN_00480
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
UCYN_00480
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
UCYN_00480
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
UCYN_00480
Enzymes [BR:
cyu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
UCYN_00480
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Gene cluster
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Motif
Pfam:
SHMT
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_1_2
Poly_A_pol_cat
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ADB94804
UniProt:
D3EMV4
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All DBs
Position
53499..54770
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AA seq
423 aa
AA seq
DB search
MILDNANLDSLNEKDPIVMSIIRGELQRQREHLELIASENFTSLAVLEAQGSILTNKYAE
GLPYKRYYGGCEWVDKVEQIAIDRAKKIFGASHVNVQPHSGAQANFAVFLSLLNPGDKIM
GMDLCHGGHLTHGSPVNFSGKWFQTCHYGVEMHNEQLNYDAILKLAQSEKPKLLICGYSA
YPRTIDFEKFRIIADKVGAYLMADISHIAGLVASGHHSNPLPYCDVVTTTTHKTLRGPRG
GLIMTNNIDLGKKFDKAVFPGTQGGPLEHVIAAKAVAFKEALDSDFKIYSGKVINNAKSL
AEQLKKRDFRLVSDGTDNHLILIDTRSIRMSGKEADNLISTINITANKNTIPFDPESPFV
TSGIRLGSPAMTTRGLGTEEFIEIGNIIADRLLNPEDEAVKQNCFHRVKTLCNKFPLYPD
LNV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgattttagataatgctaatttagattctttaaatgaaaaggatcctattgttatgtca
ataattcgaggagagcttcagagacaacgtgaacatttagagttgatcgctagtgaaaac
ttcacttctcttgctgttctggaggcacaaggatctatattaactaataaatatgcagaa
gggttaccttacaaaagatactatggtggatgcgaatgggttgataaggtagaacaaatt
gcaattgatcgtgcaaaaaaaatatttggggcttctcatgtaaatgtacaacctcattct
ggagcccaagctaattttgctgtttttttaagtcttcttaatcctggtgacaaaattatg
ggtatggatttatgtcatggaggacatcttactcatggctctcctgtaaatttctctgga
aaatggtttcaaacttgtcactatggagttgaaatgcacaatgaacaattaaactatgat
gcaatcttaaaactggcacaaagtgaaaaacctaaattattaatttgtggctattctgcc
tatcctagaactattgattttgagaagtttcgcataattgctgataaagttggagcctat
ttaatggctgacatttctcatattgcaggtttagtagctagtggacatcattctaaccct
ttgccttattgtgatgtagtcacaactactactcataaaaccttgagagggcctagaggt
ggattaataatgactaataatatagatctggggaaaaaatttgataaagcagtattcccc
ggcacacaaggaggtcccttagaacatgttattgctgctaaagctgttgccttcaaagaa
gctttagactcagattttaagatatattcaggaaaggttatcaataatgcaaaaagttta
gcagagcaactaaaaaaaagagattttaggcttgtttctgatggtactgataatcacctc
attctaatagacacccgatctattagaatgagtggtaaagaagctgataatttaattagc
acaattaatattacagcaaataaaaatacaattccctttgatccagaatcgccttttgtt
actagtggaattcgcttaggttctcctgcaatgactactagaggattagggacagaagaa
ttcattgaaataggtaatattattgcggatagattacttaatccagaagatgaagcagtt
aagcaaaattgtttccatcgagttaaaactttatgtaataaatttcctttataccctgat
ctaaatgtgtag
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