Candidatus Atelocyanobacterium thalassa: UCYN_04020
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Entry
UCYN_04020 CDS
T01159
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cyu
Candidatus Atelocyanobacterium thalassa
Pathway
cyu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cyu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCYN_04020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cyu03019
]
UCYN_04020
03110 Chaperones and folding catalysts [BR:
cyu03110
]
UCYN_04020
03029 Mitochondrial biogenesis [BR:
cyu03029
]
UCYN_04020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cyu04147
]
UCYN_04020
Enzymes [BR:
cyu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
UCYN_04020
Messenger RNA biogenesis [BR:
cyu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
UCYN_04020
Chaperones and folding catalysts [BR:
cyu03110
]
Heat shock proteins
HSP60 / Chaperonin
UCYN_04020
Mitochondrial biogenesis [BR:
cyu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
UCYN_04020
Exosome [BR:
cyu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
UCYN_04020
Exosomal proteins of other body fluids (saliva and urine)
UCYN_04020
Exosomal proteins of breast cancer cells
UCYN_04020
Exosomal proteins of colorectal cancer cells
UCYN_04020
Exosomal proteins of bladder cancer cells
UCYN_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Cap4_nuclease
Motif
Other DBs
NCBI-ProteinID:
ADB95139
UniProt:
D3ENT9
LinkDB
All DBs
Position
444480..446183
Genome browser
AA seq
567 aa
AA seq
DB search
MAKIVSFGDQSRRSLERGVNSLANAVRITLGPKGRNVLLEKKFGAPQIINDGITVAKEIE
LEDPLENAGAKLIQEIASKTKEIAGDGTTTATVIGQALIREGLKNVIAGANPVALRRGMD
KTVAYLVKEIESISKPVEGEAIAQVATVSAGNDPEVGKMIALAMDKVTKDGVITVEESKS
LNTELEIVEGMQIDRGYLSPYFITDQERQQVEFDDALILITDKKISAIADLVPILEGVAK
AGKPLLIIAEDVDGEALATLVVNKARGVLNVAAIKAPAFGDRRKSVLQDIAILTGGSVIS
EEVGLTLDTVSIDMLGTASKITIVKENTTIVANTDPKTTAAVQKRVEQLRKQAAETDSEY
DGEKLQERIAKLAGGVAVIKVGAATETELKNRKLRIEDALNATKAAVEEGIVPGGGTTLI
YLAIKTTEFINNLGNEEEKLAANIVEKALEAPLRQLSNNAGVEGSVIVEKVRNTDFSIGY
NALTGVFENMIAAGIIDPAKVIRSALQNASSIAGMVMTTEALVVEKPQPESESSAPDMGG
MGGMGGMGGMGGMGGMGGMGGMGGMGF
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaattgtatcatttggagatcaatctaggcgttctctagaacgaggagttaac
tctctcgctaatgccgtaagaattacccttggtccgaaaggacgtaacgtattattagaa
aaaaaatttggtgcacctcagattattaatgacggaataaccgttgcgaaagaaattgaa
ttagaagatcctttagaaaatgcaggagctaaattaattcaagaaattgcgtccaaaact
aaagagatagcaggagatgggactactactgctacagtaattggtcaagctctaattaga
gaaggtcttaaaaatgttattgctggagccaatcctgtagctttaagacgtggcatggat
aaaacagttgcttatttagtcaaagaaattgaatctatttctaagcctgttgaaggtgaa
gctattgctcaagtcgcaactgtttctgcaggcaatgatccagaagtcggtaaaatgatt
gccttggctatggataaagttactaaagacggtgtaatcactgttgaagaatctaagtca
cttaatactgaattagaaatagtagaaggaatgcaaattgatcgcggttacttatctcct
tattttataaccgatcaagagcgtcaacaggtagaatttgatgatgcgttaattttgatt
actgataagaaaattagcgcaattgctgatttagtaccaattcttgaaggcgttgctaaa
gctggtaagcccttattaataattgctgaagatgttgatggagaagctttggcaacctta
gtagttaataaagccagaggggttttaaatgttgcagcgataaaggctcccgcttttgga
gatagaagaaaatctgtacttcaagatatagctatcctaacaggaggaagtgttatttcc
gaagaagtaggattaactctggatacagtatctatagatatgttaggtacagcaagtaaa
attactatagtaaaagaaaatacgactatagtagccaatactgaccctaaaaccactgct
gcagtgcaaaaacgtgttgaacaattacgtaaacaagcagcagaaacagattctgaatat
gatggcgaaaaactacaagaacgtattgccaaattagcgggtggtgtagctgttatcaaa
gttggagctgcaacagaaacagaattgaaaaaccgtaaacttcgtattgaagatgctctt
aatgcgacgaaagctgcagtagaagaaggtattgttcctggaggaggaacaacattaatc
tatttagcaattaaaactacagaatttataaacaatctaggtaatgaagaagaaaaattg
gcagctaatatcgtagaaaaggctttagaagcacctttacgccaattatctaataatgct
ggagttgaagggtcagtaatcgtcgaaaaagtaagaaatacagactttagcattggctat
aacgcactaacaggagtttttgaaaacatgattgctgcaggtattattgacccagctaaa
gttatccgttctgctttacaaaatgcttcatccattgcaggtatggtaatgactacagaa
gctttagtagttgaaaaacctcagcctgagtctgaatcttctgctccagacatgggcggc
atgggtggcatgggtggtatgggtggtatgggtggtatgggtggtatgggtggtatgggt
ggtatgggtggtatgggcttctag
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