Candidatus Atelocyanobacterium thalassa: UCYN_04470
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Entry
UCYN_04470 CDS
T01159
Name
(GenBank) RecF/RecN/SMC N-terminal domain-containing protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cyu
Candidatus Atelocyanobacterium thalassa
Brite
KEGG Orthology (KO) [BR:
cyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyu03400
]
UCYN_04470
DNA repair and recombination proteins [BR:
cyu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UCYN_04470
Archaeal homologous recombinant proteins
UCYN_04470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_27
AAA_29
ABC_tran
AAA_21
NACHT
AAA_28
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ADB95181
UniProt:
D3ENY1
LinkDB
All DBs
Position
491006..494032
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPLKLTLKNFLSYQDVTLDFQGLHTVCICGANGAGKSSLLEAIAWTVWGQGRTSSDEDV
IHASADYVRTDFVFICYQEVYRIIRSRQRNRTNSLDFQIKSSEGFTPLSRKGVKATQESI
ISTLKLDYETFINSAYLRQGRADEFMLRRPTERKKVLADLLKLDHYENLSIKAKELARQY
KGKSEQIKLNIEANKKRLIKEKSIRIQQKMIQENIEVLNILQNKNEKVFQFIKQEDSDRK
SWLDKLLWNQERLKNLQQEIFKFRQEKEELSRKIYSYGNLINQGIKVSRKYKKLLFFRNQ
EENLANQFNIFQEFHKKKQDLEKQLLDEDNKLQLKIHQQKIGLEQLEKEEKELKNFLNNA
EDLKSALKTFDFYNQELKRLDKLRCKVSPLFKEKQELTNQTLKIQIDFEARLGQLYISEV
NYLKELGTILQKRKILCSLNDDIHDLEDEKGHHKQIKDKIQEKKIVQGKLFIDKQNNIKE
IDKLQQKIHELNIYHSNCPLCEQKLDRNRRHDVIKKIARQYKNIQKQIYKVQEKVDILEE
NINLFIFKENFLAEKLQYLNKIQQRFCQIETQLNRSGEIKDKLNSVIKEKIRVEKTIKSE
SFDLTLQNRLKNIEKKLAELNYTEENHILVRNKVDEWRWADIKNSKVNDLIYRQDQISQQ
KSDLVQQINQLGKQEEKLNNISRLKKRINLVEKRIKTLNYDKSAHEQISNSIRSSQQCVI
TYEKLQNAKKSYPLLQKYLKFTEDKLRNNYEEQNNIVKIINRLSDKLSITINYDKEIVKL
TTTLKIQRQNLDKLFGKQGRSEQAISEFKILQNEKRELQASYNNTCRQYRIHLELTKAFS
KNGIQLLMIENVLPQLEAETNKILTRLTGNELHIQFITQKLGKGITIRKKSTKLIDTLDI
LIADTEGTRVYETYSGGEAFRINFSVRLALAKLLAQRAGASLQMLIIDEGFGTQDTEGCE
RLIGAINSIASDFSCILIVTHMPQFQEAFQHRIEISKTHQGSQINIIN
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattcctttgaaattaacacttaaaaattttttaagttatcaagatgtaactcttgac
tttcaagggttgcacactgtctgtatctgcggcgctaatggtgcaggtaaatcttcttta
ttagaagcaatagcttggacagtttggggtcagggtaggacaagtagcgatgaagatgtt
attcacgcaagcgcagactatgtaagaactgattttgtatttatttgttatcaagaagtt
tatcgtattattcgtagtcgtcaacgaaacagaacaaattctctagattttcaaataaag
agttctgaaggatttactcctttaagtagaaaaggagttaaggcaactcaagaatctatt
atttctactttaaagttagattacgagaccttcattaactcagcttatctaagacaaggt
agggcagacgagtttatgctacgtcgtcctacagagagaaaaaaagttcttgcagatctt
ttaaaacttgatcattatgaaaatttatctattaaagctaaagaattagcacgtcaatat
aaagggaaatctgaacaaataaaattaaatattgaagcaaacaagaaaagattaattaaa
gaaaaaagtattagaattcagcaaaaaatgattcaagaaaatattgaagtattaaacatt
ttgcagaataaaaatgagaaagtatttcaatttattaaacaagaagatagtgatcgtaaa
agttggctagataaattactctggaatcaagagcggcttaaaaacctgcaacaagaaata
tttaaatttaggcaagaaaaagaagaattaagtagaaaaatttatagttacggaaattta
attaatcaagggataaaagtttctagaaagtacaagaaacttcttttttttcgtaaccaa
gaagaaaatttagctaaccaattcaatatcttccaagaatttcataaaaaaaagcaagat
ttggagaagcaactattagatgaagacaataaattacaattaaaaattcatcagcagaaa
attggtttagaacaattagaaaaagaagaaaaagaattgaaaaatttcttaaataatgct
gaggatttaaagtcagctttgaagacatttgatttttataatcaagagttaaaaagatta
gataaattacgttgcaaggtttccccactatttaaggaaaaacaggaattaacaaatcaa
actttaaagattcaaatagattttgaagcaaggttagggcaactatacatatcagaagtc
aattatttaaaagaattaggtacgattcttcaaaaacggaaaatattatgtagtttgaat
gatgatattcatgatttagaggatgaaaaaggacaccataaacaaataaaagataaaatt
caagaaaagaaaattgttcaaggtaaattgtttattgataagcaaaataatataaaggag
atagataagttacagcaaaaaatacatgaattaaatatctatcattctaactgtccttta
tgtgaacaaaaactagataggaatcgacgtcatgatgttattaaaaagatagcgagacaa
tataaaaacattcaaaagcaaatatataaagtacaagagaaagttgatattcttgaagaa
aatattaatctatttatttttaaggaaaattttttagctgagaaactacagtatttgaac
aaaatacaacagagattttgtcaaatcgaaacgcaactaaataggtcaggagagataaaa
gataagttaaattctgtaataaaagaaaaaataagagttgaaaaaacaattaaatctgaa
tcttttgatttaactttacaaaataggttgaagaatattgaaaaaaaattagcagaactt
aactatacagaagaaaatcatatattagtaagaaataaagttgacgaatggcgttgggct
gatattaaaaactctaaagttaatgatttaatttatagacaagatcaaatctctcagcaa
aaatctgatttagttcaacaaattaatcaattaggaaaacaagaagaaaaactaaacaac
atttcaagattaaaaaaaagaattaatctagtagaaaaaagaattaaaaccttgaattac
gataaatctgctcacgagcagatttctaattccattcgtagttctcaacaatgtgttatt
acttatgaaaaactacaaaatgcgaaaaagtcttatcccttattacaaaaatatttaaaa
tttacagaggataaattaaggaataactatgaagaacaaaataatattgttaaaattata
aatcgcttatccgacaagcttagcattacaataaactatgataaagaaatagttaaacta
acaacaactcttaaaatacaacgacagaatttagataagttgtttgggaaacaaggtaga
tctgagcaagcaatatctgaatttaaaatattacaaaacgaaaaaagagaattacaagca
tcatataacaatacttgtagacagtaccgtatacatctagaactaaccaaagcttttagt
aaaaatggtattcagctactaatgattgagaatgtattgcctcaattagaagcagaaaca
aataaaattctgacgcgtttgacaggaaatgagctgcacatccaatttattactcaaaaa
ttaggaaaaggcatcactattcgcaaaaaatcgacgaaattgattgatactttagatatt
ttaattgctgatacagagggtactcgtgtatatgaaacatattcaggaggagaagctttt
agaataaatttttctgtacgtctggctctagctaagttactagcgcaaagagcaggcgca
tcattgcaaatgttgataattgacgaaggctttggtactcaagatactgaaggttgcgag
cgtctaattggagcaatcaacagcatcgcttccgatttttcttgtatattaatagttaca
catatgccccagtttcaagaagcttttcaacatcgtatagaaattagcaagacccatcaa
ggctcacaaataaatataataaactga
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