Candidatus Atelocyanobacterium thalassa: UCYN_07220
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Entry
UCYN_07220 CDS
T01159
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
cyu
Candidatus Atelocyanobacterium thalassa
Brite
KEGG Orthology (KO) [BR:
cyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyu03021
]
UCYN_07220
03009 Ribosome biogenesis [BR:
cyu03009
]
UCYN_07220
Transcription machinery [BR:
cyu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
UCYN_07220
Ribosome biogenesis [BR:
cyu03009
]
Prokaryotic type
rRNA transcription factors
UCYN_07220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_NusA_C
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADB95418
UniProt:
D3EPL8
LinkDB
All DBs
Position
820671..821834
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AA seq
387 aa
AA seq
DB search
MSLVSLPGLTNMIGEISQRHNLPKPAVQEALREALLKGYERFRRSQNLDRQPFYDEYFDN
FEVELDTEEEGFRILSTKKIMENVENIDHHISLQEVQEVASEAQLGDEVVLDVTPEQKDF
GRMAAIQTKQVLLQKLRDQQRKLIQEEFQELEGTVLNARVLRFERQDIIVAVQSTFGQPE
VEAIIPKQEQLPNDNYRANSSFKILLKKVREGSHRGPQLLVSRAAAGLVVDMFSIEVPEI
EEDIVRIVAVSREANPPSRYVGPRTKIAVDTLERDVDPVGACIGARGSRIQAVVNELRGE
KIDVIRWSPDPATYIANALSPARIDEVILISPDERHALILVAEDQLSLAIGKEGQNVRLA
ARLTGWKIDIKNTIAHREELENQQFED
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggttagtttacctggattaactaatatgattggagaaattagtcaacgtcat
aatttgcccaaacctgccgttcaagaagccctaagagaggctcttttgaaaggctatgag
cgttttcgacgttctcaaaatttagatcgtcagcctttttatgatgagtattttgataat
ttcgaggttgagttagatacagaagaagaaggttttagaattttatccacaaaaaaaatt
atggaaaatgtggaaaatattgaccatcatatttcccttcaagaagttcaggaagtagct
tcagaagctcaacttggtgatgaagttgttttagatgtcacacctgaacagaaagacttt
ggtcgaatggctgcgatccaaacgaagcaagtacttttacagaaattacgagatcagcaa
aggaaactgattcaagaagaatttcaagaattagaaggtacagttcttaacgcaagagtt
ttacgctttgagcgtcaagatatcatcgttgctgttcaaagtacttttggtcagcctgaa
gtagaagcaattattccaaaacaggaacaattaccaaatgataactatcgagccaattca
tcttttaaaatactacttaaaaaagtaagagaaggatctcatcgtggtcctcaactttta
gtatcacgagctgcggcaggtcttgtagtagacatgttttccatagaggttcctgagatc
gaggaagacatagtgagaattgttgctgtttctagagaagctaatcctccttcccgctat
gtaggtcctagaactaaaattgctgttgatacgttagaaagagatgttgatcctgtaggc
gcttgtattggtgcacgaggttctagaattcaagcggtagttaatgaattaagaggagaa
aaaatagatgttattcgctggtctcccgacccagctacttacatagccaatgcccttagt
cctgctcgtatagatgaagtaatattgatcagtcctgatgaacggcatgctctaatatta
gttgcagaagaccaacttagcttagctattggaaaagaagggcaaaatgttagattagcg
gcacgattaacaggatggaaaattgatatcaaaaatactattgcccatagagaagaatta
gaaaatcagcaatttgaagattaa
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