Candidatus Atelocyanobacterium thalassa: UCYN_09320
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Entry
UCYN_09320 CDS
T01159
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cyu
Candidatus Atelocyanobacterium thalassa
Brite
KEGG Orthology (KO) [BR:
cyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyu03400
]
UCYN_09320
DNA repair and recombination proteins [BR:
cyu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UCYN_09320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
Zn_ribbon_LapB
ChlI
AAA_22
ATPase_2
NTPase_1
AAA_16
AAA
nSTAND3
AAA_14
AAA_24
GvpD_P-loop
ABC_tran
Lon_C
SLFN-g3_helicase
NACHT
NPHP3_N
Rad51
DUF6510
NB-ARC
DUF7125
AAA_5
MCM
Elong_Iki1
AAA_18
BslA
Bac_DnaA
RNA_helicase
AAA_33
zf-RING_10
Motif
Other DBs
NCBI-ProteinID:
ADB95613
UniProt:
D3EQ63
LinkDB
All DBs
Position
1068932..1070386
Genome browser
AA seq
484 aa
AA seq
DB search
MAKKRNVYVCNICGTESVQWFGKCESCQTYGSLEEKIVVTPSSSDNILRRERSLYSNKEN
NSRATPKPNISNYFDEIVDNEKMQFQSGYDELDRVLGGGVVPGSLVLIGGDPGIGKSTLL
LQVANKLAQKLPRILYISAEESAQQIKLRASRLMMLGTEEKHIERKELERCNRKNLFILS
ETNLEEILRELESLQPQVAIIDSIQTLYLSTLNSAPGSVSQVKECTSVLMRLAKRDNITL
LIVGHVTKEGAIAGPRVLEHLVDTVLYFEGDRYASHRVLRSVKNRFGATHEIGIFEMIES
GLVEVKNPSELFMGNQNELVPGTAIVVACEGTRPLVVELQALVSPTSYPSPRRSTTGIAY
SRLQQILAVLEKRVGIPLSKLDVYVSSTGGLGVEEPAADLGIAIAITASVKDKVIIPNTI
LIGEVGLGGQVRSVPQLELRLKEAVKLGFTRAIVPNSKNYTFNVNLKVIPVGKVTDAINA
AFSS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaagaaacgtatatgtatgcaatatctgtggaacagaatctgttcaatgg
ttcggcaagtgtgaatcttgtcaaacttatggaagcttagaagaaaaaattgttgtaaca
ccaagttcttctgacaatattttaagaagagaaagatcgttatattcgaataaagaaaat
aattctagagctactccaaaaccaaatatttcaaattatttcgatgaaattgtagataat
gagaaaatgcagtttcaatctgggtatgatgaattagacagagtcttaggtggaggagtt
gttccaggttctttagttttaattggcggcgatcctggtattggaaaatcaactctttta
ttacaagtggctaataaattagctcaaaagttacctcgcatcttatacatttctgcagaa
gaatcggcacaacaaatcaaattacgtgcttcccgcctaatgatgctaggcactgaagaa
aaacacatagagagaaaagaactagaacgatgtaatcgtaaaaatcttttcattttatca
gaaaccaatctagaagagattcttagggaactagaatctttacagcctcaagtagctatt
atcgatagtattcaaactttatacctttcaacgttaaattcagcccctggctccgtttct
caagtgaaggaatgtacctcagtattaatgagattggcaaaaagagataatattactttg
ctcattgttggtcatgtaacaaaagaaggagctatagctggtcctagagtattagagcat
ttagtagacacagtattgtattttgaaggagatagatatgcttctcatcgtgtcttaaga
tcagttaaaaatcgttttggtgctactcatgagattggtatttttgaaatgattgaaagt
ggcttggtagaagtcaaaaatccttcagaattatttatgggaaatcaaaatgaacttgta
ccgggaacagctattgttgttgcctgtgaaggtactcgtcctctagtcgtagaattacaa
gctctagttagcccaactagctatccttctccccgtcgttctacaacaggcatagcatat
agtcgattacagcaaatattggcagtgttagaaaaaagggtaggaattcctttatctaag
ttagatgtatatgtttcttctacaggaggtttaggtgttgaagaacctgcagcagactta
gggatagcaattgctattactgctagcgttaaagataaagtaattattccaaatactata
ttaattggtgaagtgggattaggaggccaagttcgttcagtaccacaattagaattacgt
ttaaaagaagctgttaaattaggatttacaagagcgattgttccgaatagtaagaattat
acttttaatgttaatttaaaagttatccctgtaggaaaagtaactgatgctattaatgct
gctttttcatcttaa
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