Candidatus Atelocyanobacterium thalassa: UCYN_11260
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Entry
UCYN_11260 CDS
T01159
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cyu
Candidatus Atelocyanobacterium thalassa
Brite
KEGG Orthology (KO) [BR:
cyu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyu03016
]
UCYN_11260
Enzymes [BR:
cyu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
UCYN_11260
Transfer RNA biogenesis [BR:
cyu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UCYN_11260
Prokaryotic type
UCYN_11260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
WW_1
Motif
Other DBs
NCBI-ProteinID:
ADB95797
UniProt:
D3EQP7
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All DBs
Position
1269269..1270168
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AA seq
299 aa
AA seq
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MLGFVGLNKPSGLTSHDCISRLRKLFKFKKIGHGGTLDPSATGVLPIAIGKATRLIPFLP
KNKAYKATIIFGLKTRTDDLEGEIIRVKSGIGLTLEDVKSLLNNFIGNIEQIPPLYSAIQ
KNGKRLYFSAREGEKVDIPSRTVRIDTIKILDWHPGEFPELTINIQCGSGTYIRSLARDL
GEKLGIGGTLAKLVRTKSCGIILPDTSTLERISKQFKYNEFTLIKPEYLLKELPSLKLSS
KESMCWCQGQKILINIPKLELFSKFIRVKNEEEFLGIGCYVSDGKDDFLKPKVVIKEIL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctaggatttgtcggtttaaataaaccatcagggttaacatcccatgactgtattagt
aggttaagaaaattatttaagtttaaaaaaataggtcatggaggtactttagatccttca
gctacaggtgtcctacctatagctataggtaaagcaacacgcttgataccttttttacca
aaaaataaagcttacaaagctaccataatttttggcttgaaaactcgaacagatgacttg
gaaggggaaattattagagtaaaatctgggattggtctcaccttagaagatgtcaaaagt
ttattaaacaactttataggaaatattgaacagattccacctttgtatagtgccattcaa
aagaatgggaaacgtttatatttttctgctagagagggggaaaaggtagatattccatca
agaacagttagaatcgacactatcaaaatactagactggcatcctggtgagtttccagaa
ttaacaattaatattcaatgtggctcaggaacttatattagatccttagctagagatttg
ggcgaaaagttaggtattggtgggactttagctaagcttgtcagaacaaaaagttgtgga
attatattgccagatacatcaactctagaaagaataagtaaacagttcaaatacaatgaa
tttactttaattaaaccagaatatttattaaaagaacttccttccttgaaattatcttca
aaagaaagtatgtgttggtgtcaaggacaaaaaatattgattaatattccaaaattagag
ttattttctaaatttatccgagtcaagaacgaagaagaatttttaggaataggttgttac
gtatctgatggcaaggatgactttcttaaacctaaagttgttatcaaagaaattctttag
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