Cycloclasticus sp. PY97N: CPC19_00205
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Entry
CPC19_00205 CDS
T05126
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cyy
Cycloclasticus sp. PY97N
Brite
KEGG Orthology (KO) [BR:
cyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cyy03016
]
CPC19_00205 (rnd)
Enzymes [BR:
cyy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CPC19_00205 (rnd)
Transfer RNA biogenesis [BR:
cyy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CPC19_00205 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ATI01933
LinkDB
All DBs
Position
36141..37292
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AA seq
383 aa
AA seq
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MTKPHYIDTNEQLSEFCNTIKNEPWLAIDTEFQREKTYRSILALIQIATADIVAIIDPIA
CDIKPLLDILYNQNILKVFHAARQDQEIFYDLRGKPLAPVFDTQIAAPILGHPEQAGYAR
LVDDILGVQLSKAHSRTDWLRRPLSEEQITYAADDVIYLAKLYPLLENQLKEKDRLNWLA
PAFADLCKPSLYSNPPELAWKRIRAAKRLKGGALSALQKLAEWREDLAQQKDIPRGWIIK
DDILIEVAKLKPTNLHTLSSIRGISDKFTDKFGRAIIDIIANAIDKKPASTAAQQKPKKV
TEKQEALADLLMAQVRLKAAAANVNATSLTNRKELLQLIHGQRDLELLSDWRNEMVGQDL
LATLEGDNNFSVTSGELVISPST
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacctcactatatcgacaccaatgaacagctttctgagttttgtaacacgata
aaaaacgaaccttggttggcgatagatactgagtttcaacgggaaaaaacctaccgttca
atactggcgttaattcaaattgccactgccgatatagtcgctatcatcgacccaatagcc
tgtgacatcaagcccttattggatattttatacaaccaaaatatactcaaagtcttccat
gccgcacgtcaagatcaagaaattttctacgatttacgcggcaagccattagcgcctgtt
tttgatactcaaattgccgcgcccattttaggccacccagaacaagccggctatgcacga
ttagtggatgatattttgggtgtgcaattaagcaaagctcattcacgtacagactggcta
cgtagaccgttaagcgaagaacaaatcacctatgcagctgacgatgtaatttatctagcc
aagctatacccgttattagaaaaccaactaaaggaaaaagaccgacttaattggttggcg
ccagcctttgccgatttatgcaaaccttcactgtattccaacccaccagaacttgcatgg
aaaaggatccgagcagccaaacgtttaaaaggtggcgccttatctgcgttacaaaaatta
gccgaatggcgtgaagaccttgcacaacaaaaagacatccctcgtggctggataattaaa
gatgatattttaatagaggtggccaaactcaagccaaccaatctccacactctatcgtct
attcgcggcatttcagacaaattcaccgataaatttgggcgcgcaattatcgacattatt
gccaatgccattgacaaaaaaccagcctctactgcggctcaacaaaaacctaagaaagtc
accgaaaaacaagaagccttagccgatctattaatggctcaagtaagattgaaagccgcc
gccgcgaacgtcaacgccacgtctctcaccaatcgtaaagaattattacagttgatccat
ggtcaacgcgatcttgagttattgagtgattggcgcaatgagatggttggccaagatctc
cttgctacgctggaaggcgataacaactttagtgtcacttcaggtgaactcgttatttca
ccttcaacataa
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