Cycloclasticus sp. PY97N: CPC19_01290
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Entry
CPC19_01290 CDS
T05126
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cyy
Cycloclasticus sp. PY97N
Pathway
cyy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPC19_01290 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyy03400
]
CPC19_01290 (xth)
Enzymes [BR:
cyy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CPC19_01290 (xth)
DNA repair and recombination proteins [BR:
cyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CPC19_01290 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ATI02136
LinkDB
All DBs
Position
250720..251496
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AA seq
258 aa
AA seq
DB search
MKIVSININGIRAGERKGFFNWVQQLDADVLCLQEIKAQEDQLTADTFWPANYHCFYHPA
EKKGYSGVAIFSKQKPDNVTKGIGWEDFDAEGRFIEAAFGNLRVSSIYMPSGSSKESRQA
FKYDLMDRLMPVLQEKQKDGNQHIICGDWNIAHKKIDIKNWRGNQKNSGFLPEERAWLDE
LFGKEGWGDAFRLVNQEAEQYTWWSNRGQAWANNTGWRIDYQVISENLKNTVANASIYKD
ERFSDHAPLIVDYDIPTA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtttcaatcaatattaacggcattcgcgctggcgaaagaaaaggctttttt
aactgggtacaacaactcgatgctgatgtactgtgcttacaagaaataaaggcccaagaa
gatcaactaactgccgataccttctggcccgctaattaccattgtttctaccatcctgcc
gaaaagaaaggttacagcggcgtcgccattttttccaagcaaaagcctgacaatgtaact
aaaggtattggttgggaagactttgatgccgagggtcgctttattgaagccgcctttggc
aacctaagggtatcatctatttacatgccatcggggtcctcaaaagaatcccgccaagcc
tttaagtacgacttaatggaccgattaatgcccgtgctacaagaaaaacaaaaagatggc
aaccaacatattatttgtggggactggaatattgcacataaaaaaatagacattaagaac
tggcgcggcaatcaaaaaaactctggttttttacccgaagagcgcgcttggctagacgag
ctatttggcaaagaaggctggggtgatgcctttcgccttgtgaaccaagaagccgaacaa
tatacatggtggtccaaccgaggacaggcgtgggccaataacactggctggcggatagat
taccaagttatttcagaaaacttaaaaaatacggttgccaatgcatccatctataaagat
gagcggttttctgaccatgcccccttgattgttgattacgacatccctacagcctaa
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