Cycloclasticus sp. PY97N: CPC19_02305
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Entry
CPC19_02305 CDS
T05126
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cyy
Cycloclasticus sp. PY97N
Brite
KEGG Orthology (KO) [BR:
cyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cyy03032
]
CPC19_02305
03400 DNA repair and recombination proteins [BR:
cyy03400
]
CPC19_02305
Enzymes [BR:
cyy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CPC19_02305
DNA replication proteins [BR:
cyy03032
]
Prokaryotic type
DNA Topoisomerases
CPC19_02305
DNA repair and recombination proteins [BR:
cyy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPC19_02305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
ATI02333
LinkDB
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Position
459154..461445
Genome browser
AA seq
763 aa
AA seq
DB search
MSALVIVESPAKAKTIEKYLGKGFTVLASYGHVRDLVPKEGAVDPDHDFAMKYSLVERNQ
RHVQAITKAMKKADELYLATDPDREGEAISWHVSELLKEKKLLKDKPVHRVVFHEITKKS
IQKAIQEPRELSMDMVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIVE
RELEIEAFNSREYWSIEAATKAANQSFKAKLTHVDGEKLTQFSVENAADANKIKDDIVAV
AANKLLVKKLQKKQRKRNPAAPFTTSTLQQEASRKLGFTTKKTMQIAQQLYEGVTIGSES
IGLITYMRTDSVNLAAEAVDEIRQLIELRYGKENLPKQAPVYKTKSKNAQEAHEAIRPSS
AARIPDEIRGSLSNDQYKLYLLIWKRVVASQMVHALIDGVSADLTCGKGYVFRATGSTVN
KPGFMSVYLEGKDDSKEDDDNKEKMLPPLEEGALVDLQEVIANQHFTEPPPRYGEASLVK
ALEEHGIGRPSTYASIISTLQNRDYVELETKRFYPTDVGRIVNKFLTQHFTNYVDYDFTA
KLEDGLDAVSRGEMQWLPLMKTFWQPFKTLIDDKEVSVQRSDVTQEALEEKCPECGKQLS
IRLGRNGRFIGCTDYPECSYTRNLNDDAASAEPEVVEGRKCPKCESNLIIRTGRYGKFIG
CSAYPDCKHMEPLEKPKDTNVVCPDCKKGTILERKSRKGKIFYSCSNYPKCKYALWNEPI
NEPCPNCNWPILTLKTTKRRGTEKVCPQQECSYVTPCEEMAKT
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctcttgtcattgttgaatcgccagcaaaagcaaaaaccattgaaaaatactta
ggcaaaggatttactgttctagcgtcatatggccacgtgagggacttggttccgaaggag
ggcgcggtagacccggaccatgattttgcgatgaagtattctttggtcgaaaggaatcag
cgtcatgtgcaggcgattacaaaggcgatgaaaaaagccgatgagctttatcttgcaacc
gacccggatagagagggtgaggccatttcatggcatgtttctgagttattaaaggaaaaa
aaactgctcaaagataagccggtacatcgagtggtttttcatgagattactaaaaaatca
attcaaaaagcgatacaggagccgcgtgaattatcaatggatatggttgatgcgcagcaa
gctaggcgcgcactcgattatttggttggttttaatttgtcgccgttgttatggaaaaaa
atcagacgcggcttatctgctggacgggttcaaagcccagcgttaagattaattgttgaa
cgtgaattagaaatagaagctttcaatagtcgtgaatattggagtattgaagcggcaact
aaggcggctaaccaatcttttaaagccaagctaacacatgtggatggcgaaaagctgacc
cagtttagtgtcgaaaacgcggcggatgcgaataaaataaaagacgatattgtggctgtt
gccgccaataaattattggttaaaaagctacaaaaaaaacagcgtaaacgtaacccagcc
gccccctttacaacctccacacttcagcaagaagcatctagaaagttaggttttacaact
aaaaagaccatgcagattgctcagcagctttatgaaggggtaaccatcggttcagaatca
attggtctgataacgtatatgcgaacagattcggtgaacttagcggctgaagcggttgat
gaaattcgtcaattgattgaattgcgttatggtaaagagaatctacctaaacaagcgccg
gtttacaaaactaaatcaaaaaatgctcaagaagcccatgaggctattcgtccaagctca
gcagcaaggattcctgatgaaattagagggtcgttgtcgaatgaccaatataaactctat
ttattgatctggaaacgcgtggtggccagccaaatggttcatgcgttgattgatggggtg
agtgcagacctaacctgcggcaagggctatgtttttcgggccacaggttcaacggtaaat
aaacccggtttcatgtcagtgtatcttgaaggtaaagatgacagtaaagaggatgatgac
aataaggaaaaaatgttaccacctctggaagaaggtgcgctagttgatttgcaagaggtg
atagcgaaccaacattttactgaaccgccccctcgttatggtgaggcaagcctagttaaa
gcgcttgaagagcatggaattggccggccatcgacctatgcatcgattatttcaacatta
caaaatcgcgactatgtagagctagaaacgaaacgcttttatccgactgatgttgggcga
attgtaaataaatttttaacgcagcattttacgaattatgtggattatgacttcaccgct
aaattagaagatggcctggatgccgtttcaagaggtgaaatgcagtggttgccattaatg
aagacgttttggcagccatttaaaacactgattgatgataaggaagtcagtgttcaacgt
agcgatgttacgcaagaggcgctggaggaaaagtgtccagagtgcggtaaacagctatcg
attcgcttgggtagaaatggacggtttattggctgtacggattaccccgaatgcagttat
acgcgtaacttgaatgatgatgccgcttctgcagagcctgaagttgttgaagggagaaaa
tgcccaaagtgtgaatctaatttaattattcgcaccggtcgatatggcaaatttataggt
tgtagtgcttatccagattgtaagcatatggagcctttggagaaaccaaaagacacgaat
gttgtttgtcctgattgtaaaaagggaacaatacttgaacgtaaatctcgaaagggtaaa
atattctactcgtgctctaattatcctaagtgtaaatatgcattatggaatgagccgatt
aatgagccatgcccaaattgtaattggcctattttgacattaaaaacaactaaaagacgt
ggcactgaaaaagtctgtccacaacaagaatgttcctacgtaacgccatgcgaagaaatg
gctaaaacttaa
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