Cycloclasticus sp. PY97N: CPC19_04400
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Entry
CPC19_04400 CDS
T05126
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cyy
Cycloclasticus sp. PY97N
Pathway
cyy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cyy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPC19_04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyy03021
]
CPC19_04400
03400 DNA repair and recombination proteins [BR:
cyy03400
]
CPC19_04400
Enzymes [BR:
cyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPC19_04400
Transcription machinery [BR:
cyy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPC19_04400
DNA repair and recombination proteins [BR:
cyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPC19_04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ATI02732
LinkDB
All DBs
Position
873632..874636
Genome browser
AA seq
334 aa
AA seq
DB search
MQNLLSGFLQPKVTGVQSISPTCSKVTIEPMERGYGHTLGNALRRVLLSSISGCAVTEIK
IEGVLHEYTTIDGVQEDVIDIMLNLKNLAVNLNAKDEAYLTIEKSGEGQVTAADIQIDHD
VEIANPELVIANLTANGKLSMSIKVERGSGYQTAASRKQDDEDLPIGTLLLDASFSPIKR
ISYNVDTARVEQRTNLDKLIIELETNGTTDPEETIRAAATILHHHIAVFVDLKDIVEVPE
EPKEPEFDPILLRPVDDLELTVRSANCLKAEQIFYIGDLIQRTEVELLKAPNLGKKSLTE
IKDVLASKGMSLGIRLENWPPSSLITSDRAVGSI
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatttactttcaggttttttacagcctaaggttacaggagttcaatctatatct
cctacatgttctaaagttaccatagaaccaatggaacgcggatatggtcacactttaggt
aatgccttaagacgtgttcttttatcttcaatttctggttgcgcagtgaccgaaattaaa
attgaaggtgttttacacgagtacacaacaatcgatggcgtccaagaagatgttattgat
atcatgttgaatcttaaaaatcttgcggttaatctaaatgcaaaagatgaagcctatttg
acaatcgaaaaatctggagaaggtcaagttactgctgctgacattcaaattgatcatgat
gttgaaatagcgaatccagaacttgttatcgccaatttaactgccaatggtaagctttcc
atgtcaattaaagttgaacggggttcaggttatcagacagccgcttcacgtaaacaagat
gatgaagatttaccgattggtacacttttattagatgcttcttttagccctattaagcgc
atctcttataatgtagatacagctcgtgttgagcaacgtactaaccttgataagcttatt
attgagcttgaaacaaacggtacgactgatcctgaagaaacgattagagcggctgcaacg
attctacatcatcatattgctgtttttgttgaccttaaagacattgtagaagttcctgag
gaacctaaagaacctgagttcgatcctattctattacgtcctgttgacgatctagaactg
acggttcgatcagcaaattgtttgaaagctgaacaaattttctacattggtgacttaatt
caacgtacagaagttgaattattaaaagcaccaaatcttggtaaaaaatcattaacagaa
attaaggatgttcttgcttcaaagggcatgtctttaggtattcgtcttgaaaactggcca
ccatctagtttaattactagtgatagagctgtaggttcaatttaa
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