Cycloclasticus sp. PY97N: CPC19_05305
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Entry
CPC19_05305 CDS
T05126
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
cyy
Cycloclasticus sp. PY97N
Brite
KEGG Orthology (KO) [BR:
cyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyy03021
]
CPC19_05305
Transcription machinery [BR:
cyy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CPC19_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
COMMD1_N
DUF4898
Motif
Other DBs
NCBI-ProteinID:
ATI02904
LinkDB
All DBs
Position
1060425..1063271
Genome browser
AA seq
948 aa
AA seq
DB search
MSQHIFYPGQRWVSHSETELGLGVVESIEGRHVTLFYPAVEEPRVYALDNAPLSRVTFNV
GDTVSHQGGQEVTIEQTQEHNHCMIYLCIDGQGEQVVLHEIDLDSTGAFNKPQSRLFTGQ
LDKNKLFDLRLKTLDFQRKLDQFKGFGLSGPRVQLLPHQFYIASKVTERNAARVLLADEV
GLGKTIEAGLILHQQLLTGSIERVLIVVPDALIHQWLVELLRRFNLSFTILDRERCDAIR
EEGDINPFETAQLVLCQLSFLSENANYHASAVAANWDLMIVDEAHHLFWNENNVSNEYRC
IEELANHVPGLLLLTATPEQLGVTSHFARLRLLDPDRYYDLAAFREEQAGYQEINQLIKQ
LMAANSIDGVLADVNLKQSLLQLLGEQAVLSDDISVDSLIDALLDRHGTGRVLFRNTREN
IDAFSSRQLHAYQLPALSVENEFELDTDLALAKTLLPEMLLGEDWLTLDPRITWLMEWLD
THKNEKVLLICAQQQTAQELHEYLKMRTIFASAVFHEGMSLIERDRAAAYFSDAEEGAQI
LICSEIGSEGRNFQFAHHLVLFDLPLNPDLLEQRIGRLDRIGQTDTVHLHVPCIEGTGQH
RLMNWYDKGLNAFSHVCSTGHHVYAIVKADLKEALLGDASDDEFAAIIEKTSTLMQQSIA
DMHAGRDLMLELNSCRKEQAQEIIDEISLSSSHLELSHYMEEVFESFGVEQQYHSEDSIV
IKPSGHLQSDAFPSLPEDGLTATFNRKIALSREDFQFLTWEHPMVTGAMEQIINSEFGNS
TFCTMALPPIPAGTVILEAIFTTHCPAPKRLQLHRYLPKTVKRIVVGSNGLDMTDILKPE
HIESRVTFVKKSIALNIIEHGQEAIKTLIEKAEKLVVVHQEALVKQSVEEMQQQESLNLE
RLVALARVNPNIRDSEITQLKANINDLGSYIKRASFKLDAIRVILTTD
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacatattttttatcctgggcaacgttgggttagtcattctgaaactgaattg
ggcctaggggttgttgagagcatagaagggcgccacgtgacattgttttacccagctgtt
gaagagcctcgggtgtatgcattggataatgcaccgctaagtagggtgactttcaatgtg
ggtgacacagtaagccaccaaggtggtcaagaagtaactattgagcaaacccaagagcat
aaccattgcatgatttatttgtgtattgatgggcagggtgagcaagtggtgctacacgaa
attgatttggatagtaccggggcgtttaataaacctcaaagtcgtttatttactgggcag
ctagataaaaacaagctgtttgatttgcgccttaaaacattagactttcaacgcaaacta
gatcagtttaaagggtttggtttatcgggcccacgtgttcagttactaccccatcaattt
tatatagcgagtaaagtaacggagcgaaatgcagcgcgtgttttactggccgacgaggtc
ggattagggaaaacaattgaagcgggtttaattttacatcagcaactattaaccggttcg
attgagcgagtattgattgttgtccccgatgcacttattcatcaatggttggtagaactc
ttacgtcgttttaatttgtcttttacaattctagatcgtgaacgttgtgatgcgattaga
gaagagggtgacataaacccgtttgaaacggctcaattagtactttgccaattatctttt
ttatctgaaaatgcgaattatcatgcctcagcggtagcagcaaattgggacttgatgatt
gttgatgaagcacatcatttattctggaacgagaataacgttagtaacgaataccgctgt
attgaagaattggcaaatcatgtgccgggcttattgttattgactgctacacctgagcaa
ttaggggtcacgagccatttcgcaaggttgcgcttattagaccccgatcgctattacgat
ttagccgcttttcgtgaagaacaagccggttaccaggagattaatcagcttattaaacag
ttgatggcggcaaactccattgatggggtacttgctgatgttaatttaaagcaatcgctg
ttgcagctactgggtgagcaagcggttttatctgacgatatatctgtggactcgctcatt
gatgcattgctcgatcggcacggtactggccgcgtgttgtttaggaacacgcgagaaaat
atagatgcgttttcatctaggcaattacacgcgtatcaattacctgcgcttagcgtagaa
aatgagtttgagctagacaccgatcttgcattggccaaaacgctattgcctgaaatgtta
ttgggcgaagactggttgacgctagatccacgtatcacctggttgatggaatggttggat
acgcataaaaatgaaaaggtattgttgatttgcgcgcagcaacaaacggcgcaggagtta
catgaatatttaaaaatgcgcacaatttttgcgtctgccgtttttcatgaaggtatgagc
ctaatagaaagagatagggctgcggcgtatttttctgatgcagaggaaggagctcagatt
cttatctgttctgaaattggaagtgaaggtcgaaattttcagtttgcgcatcacttggta
ttatttgacctgccacttaatccagacttgttagaacaaaggataggtcgcctagatcga
attggtcaaaccgatacggtgcaccttcatgtgccatgtatagagggaaccggccaacat
cgattgatgaattggtatgataaaggactcaacgcctttagccatgtctgctcaacaggg
caccatgtttatgcgattgttaaagcggatttaaaagaagccttgctgggtgatgcgtct
gatgatgaatttgcagcgatcattgaaaaaaccagtacgttaatgcaacagagcatagcg
gatatgcatgcaggccgtgacttgatgttggaattaaactcttgcagaaaagagcaggca
caagaaattattgatgaaattagtttgtcatcaagccacttagaactgtctcattacatg
gaagaagtctttgaaagttttggtgttgagcagcaataccatagcgaagacagcattgtt
attaagccaagtggtcatttgcaaagtgatgctttccctagtttgcctgaagacggttta
acggcgacgtttaaccgaaagattgccttgtcacgtgaagattttcaattcttaacctgg
gaacaccccatggtgaccggcgcgatggagcaaattatcaatagtgagtttggtaattca
acgttttgtaccatggcattaccgcctattcctgctggaacggtgattctcgaagctatt
tttacaacgcattgtcccgcacctaaacgcttacaattgcaccgctatttgccgaaaacg
gtaaagcgaattgtggtcggttcaaatggcttggatatgactgatattttaaagccagag
catattgagtctagggtgacgtttgttaaaaagtcaattgcactgaatattattgagcat
ggtcaagaggcgattaaaacactgattgaaaaagctgagaaactggttgttgttcaccaa
gaagcgttagtaaaacaaagtgttgaagagatgcaacaacaagaatcgttgaatctagaa
aggcttgttgcattggcgcgggtaaacccaaatattcgcgatagcgagattactcaacta
aaagccaatattaacgacttaggtagctacattaaaagagcctcatttaagttagatgca
attcgcgttatcttgaccacagactag
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