Cycloclasticus sp. PY97N: CPC19_07480
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Entry
CPC19_07480 CDS
T05126
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cyy
Cycloclasticus sp. PY97N
Pathway
cyy03410
Base excision repair
cyy03430
Mismatch repair
cyy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPC19_07480 (recJ)
03430 Mismatch repair
CPC19_07480 (recJ)
03440 Homologous recombination
CPC19_07480 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyy03400
]
CPC19_07480 (recJ)
DNA repair and recombination proteins [BR:
cyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CPC19_07480 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPC19_07480 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CPC19_07480 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ATI03314
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Position
complement(1515055..1516815)
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AA seq
586 aa
AA seq
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MAGETELASSSIVIKHRESTDHDSDALPDLHPVLRQVYLNRGVTHEQQLDRTLKNLPNYQ
RLSGIDKAVSLIKTAIKTDQKILIVADFDADGATSCAVAIRGLRMLGATNLDFVVPDRFK
FGYGLTPEIVDVALELKPDLLITVDNGISSVEGVAHAIKKGCQVIVTDHHLPPKTLPNAD
AIVNPQLQGDEFPSKSLAGVGVIFYVLLALRAALKIEGVFDKQPVPNLANLLDIVALGTV
ADVVPLDELNRKLVYQGLLRIQAKKCVPGIIALLNIAKREPERVVSSDLGFAIGPRLNAA
GRLDDMSLGIQCLLTDSEQEARDMAEQLDMLNIERRSIEEDMKQDAYKILASLKPSQHQH
DQWGVCLFDEYWHQGVIGILASRIKEKLNRPVIAFAKGDGEDVKGSARSIPGLHIRDTLD
DVASLHPGLLKKFGGHAMAAGMTIAENNLSLFIEAFNVAVKKRLNNELPDDVLLVDGEVP
DNDINLTFAETLRQAGPWGQNFPEPVFVGRFKVKQARILSQKHVKLSFEMLSNSRVIDAI
YFNVDNPDSIIGLNEVVVAYQLDVNTYMGRSRVQLLVRHLEEVKQF
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgaaaccgaattagcaagctcatctattgttataaagcatcgtgaatcaact
gaccatgattcagatgctttgccagatttacatcctgttttacggcaagtgtacttaaat
cgtggggttacccatgagcaacaacttgaccgtacattaaagaacttaccgaattatcaa
cgcctttcaggtattgataaagctgtcagccttattaagacggcaattaaaacagatcaa
aaaatactcattgtggctgattttgatgcggatggtgccacttcgtgtgcggtagctatt
agaggtttacggatgttgggtgcaactaatttagactttgttgtgccagaccgctttaaa
tttggttatggcctaacgcctgaaattgttgatgttgcactagagttaaagccagattta
ttaatcacggtagataacggtatttctagtgtggaaggggttgcgcatgctatcaagaaa
ggctgccaagtcattgttaccgatcatcatttaccacctaaaacactaccaaatgcagat
gctatcgttaatccacaactacagggtgatgagtttcctagtaaatccttagcgggtgtt
ggcgtcatcttttatgttttattggcactgagagccgccttaaaaattgaaggtgtgttt
gataagcaaccagtgcctaatcttgcaaacctactcgatattgtagcgcttggtacggtg
gcagatgtggtacccctagatgagcttaaccgtaaattggtctatcaaggcttgcttagg
atacaagcaaaaaaatgcgttccagggattattgccttacttaatattgctaagcgtgaa
ccagagcgtgttgtttctagtgatttaggttttgctattggtccacggttaaatgccgcc
gggcgacttgatgatatgtctctcggtattcaatgcttgctcaccgatagtgaacaagag
gcacgcgatatggctgagcaattggacatgttgaatatagagcgtcgttcaattgaagag
gatatgaagcaagatgcatacaagattttggcttcgttaaaaccaagtcagcatcaacat
gatcaatggggtgtttgtttgttcgatgaatactggcatcaaggtgtgataggtatactg
gcatcgcgaattaaagaaaaacttaatcgaccagtgattgctttcgcaaagggtgatggt
gaagatgtaaaaggctcagcacgttcgatccccgggttacacataagagatacgctagac
gatgtggctagtttacaccctgggttattaaaaaaattcggtggtcatgcaatggcggca
gggatgacgattgctgaaaataatttaagcctatttatcgaggcgtttaatgtagccgtt
aaaaaacgtcttaataatgaattgcctgatgatgtgttattagtagacggtgaggtgcct
gataacgatattaatttaacatttgctgaaacacttcgacaagctggaccttggggtcaa
aactttccggaaccggtttttgttggtcgttttaaggtaaagcaagcgcgaattttgtca
caaaaacacgtgaagttatcttttgagatgttaagtaacagcagagtgatagacgcgatt
tattttaatgtagataatccagacagtattattggtttaaatgaggtggttgttgcttat
caattagatgttaacacctatatggggcgctcaagggtgcaattattagttaggcatcta
gaagaagtgaagcaattttaa
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