Cycloclasticus sp. PY97N: CPC19_07975
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Entry
CPC19_07975 CDS
T05126
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
cyy
Cycloclasticus sp. PY97N
Brite
KEGG Orthology (KO) [BR:
cyy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cyy01011
]
CPC19_07975
Enzymes [BR:
cyy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CPC19_07975
Peptidoglycan biosynthesis and degradation proteins [BR:
cyy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CPC19_07975
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
HTH_28
LysM2_NFP
Motif
Other DBs
NCBI-ProteinID:
ATI03409
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Position
1626538..1628136
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AA seq
532 aa
AA seq
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MRYLITNKTISFLLFASFTILISCTPIQLKPTPTAELNPSTEAQSLASSSTIKAVQKTPS
SNVNLSKNLWSRLFSLYQFPTIENDRIQAEIDWYSKHPDYLIRVQQNAKPYLFHIVNEIE
KRGLPGELALLPIVESAYKPFAYSHGRAAGLWQFIPSTGVAYGLKQTWWYDGRRDVYAST
NAALTYLTKLSKRFDDDWFLALAGYNAGGGSVSSAMRKNRRLGHPTDFWALSLRKETRHY
VPKLIAIASILANADKYNVTLIDIPNEPFFEKVNITKQLDLARAAELAEISIEDLYILNP
SFNQWATSPEGPHYLLLPVSKSADFKTKLAALPDSQRLKWVRHKVKNGETLGQIARRYRT
TVTQIKQANPIKNNLIRAGKHLLIPTANYNNRLYASSADMRKSDIINTSRQGQKVEYYVQ
SGDSFWSIAKQYGVGVRSLAKWNAMAPRDTLRIGQKLVIWSQHPTHPSPRTQLASKRKNQ
TIRYTVKSGDSLYLISRKFNVSIIDLKRWNTLNKKYLKPGQKLKIIVDVTRT
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgatatttaatcacaaataaaacgatcagttttcttttatttgccagctttactata
cttatttcttgtaccccgatacagcttaaaccgacgccaacagctgaactaaacccttct
actgaagcacaatcgctagctagttcaagcactataaaggctgttcaaaaaacgccttca
tctaacgtcaatttgtcgaaaaatctctggtctcgtttgttctcattgtatcaattcccg
accattgaaaacgaccgcatccaagctgagattgactggtacagcaaacaccctgactat
ttaatacgcgttcaacaaaatgcaaaaccgtatcttttccatatcgttaatgaaatagaa
aaacgcggacttcccggtgaacttgccctcttacccattgttgaaagtgcttataagccc
tttgcttattcgcatggcagagctgctggtttatggcagttcatcccctctactggtgtc
gcatacggcttaaaacaaacttggtggtatgatgggcgacgtgatgtgtacgcttctaca
aatgctgctttaacttaccttacaaaactatctaaacgatttgatgatgattggtttctt
gccttagctggctataatgcaggcggcggttctgtgtcgtcagcaatgagaaagaacagg
cgactcggtcacccaactgatttttgggcacttagccttcgcaaagaaacgcgacattac
gtccccaaattaattgccattgcaagtattcttgcaaatgccgacaagtacaatgtaaca
ctcatcgatatccctaatgagccattttttgaaaaagtaaacattacaaaacaacttgac
cttgctcgcgccgctgagcttgccgaaattagcattgaagacttatacattcttaaccct
tcatttaaccaatgggcaaccagccctgaagggccccattacctactacttcccgtgtct
aaatctgccgattttaaaactaaattggctgctttacccgactcacaacgcttaaagtgg
gttcgccataaagttaaaaacggcgaaactttgggacaaattgctagacgttaccgcacg
acggttacacaaataaaacaagctaaccctattaaaaacaacctgatcagagctggcaag
catctacttatacctacggctaattacaataatcgtttatacgctagtagtgcggatatg
cgtaaaagtgacattattaacacctcgcgccaggggcaaaaagtagagtattacgttcag
tcaggcgattcattctggagtattgctaaacaatacggagtgggcgttcgcagcttagct
aaatggaatgcaatggcccccagagataccttaagaattggtcaaaagctggttatttgg
agtcagcacccaacacatccaagcccgcgtacgcaactcgcctctaaacgtaaaaaccag
actattcgctataccgtaaaaagcggtgactctttgtaccttatttctaggaagttcaac
gttagcattatagatttgaaacgttggaacaccttaaataagaaatacctgaagccagga
caaaaactaaaaattattgttgatgtcaccaggacataa
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