Cycloclasticus sp. PY97N: CPC19_09120
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Entry
CPC19_09120 CDS
T05126
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
cyy
Cycloclasticus sp. PY97N
Pathway
cyy02020
Two-component system
cyy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cyy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CPC19_09120
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CPC19_09120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cyy02022
]
CPC19_09120
02035 Bacterial motility proteins [BR:
cyy02035
]
CPC19_09120
Two-component system [BR:
cyy02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
CPC19_09120
Bacterial motility proteins [BR:
cyy02035
]
Flagellar system
Flagellar assembly proteins
Others
CPC19_09120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
MCM
VpsR
AAA_19
AAA_3
HTH_11
HTH_24
HTH_20
AAA_16
HTH_28
AAA_7
MerR
DUF6946
FleQ
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ATI03614
LinkDB
All DBs
Position
complement(1871407..1872750)
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AA seq
447 aa
AA seq
DB search
MIKQIDVLIVEDDEPLQEAIQDALTAYGYQTKCAANGLEALKVLEKYQARLVISDVQMDG
MGGQELLEMLKVRFPNLPVLLMTAHATVEQAVKAIQAGASDYLTKPFEVDQLIVHVEQTI
SPRETAFGELPSNDSCMKDIVALAGRVAKSEATVLIQGESGTGKEVLSRFIHKNSPRSKK
EFVAINCAAIPENMLEAMLFGYEKGAFTGAYQSSAGKFEQAQGGTILLDEISEMNILLQA
KLLRVLQEKEVERLGGKKTIALDVRVLATTNKDLRTLVNEGKFREDLLYRINVFPINIPP
LRERKADVLALSKTMIARHYNGDQSPPTLSANAIKLLEKHDWKGNVRELENVIQRALIMA
NGSMITENDLIFESTPSAISTEPLERSETAENELSAGVRAVEDKLILDTLVSANGSRKNT
AERLGISARTLRYKIARMREAGVEIPA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgataaaacaaatagatgtgttaattgttgaagatgatgaaccgttgcaagaagctatt
caagatgcgttaacggcttacggttatcaaacaaagtgcgctgctaacggccttgaagca
cttaaagtgctggagaagtatcaggctcgtttagtgatcagtgatgttcaaatggacgga
atgggtggtcaagaactacttgaaatgctcaaagtgcggtttccaaacttaccggtttta
ttaatgactgcgcatgccacagtggagcaggccgtcaaggcgatacaagcaggtgcatca
gactatttaacaaaaccctttgaggtggaccaactcattgttcatgtggagcaaacgatc
tcgccaagagaaaccgcgtttggtgaactacccagtaatgacagctgtatgaaagacatt
gtggcgttagcagggcgtgtcgctaaaagtgaagcgacggtattgatacagggcgaaagt
ggcacgggtaaagaagtgttatcgcgatttattcacaaaaactcgcctagaagtaaaaaa
gaatttgtggcgataaattgtgcggcgattcctgaaaacatgcttgaagcgatgttgttt
ggctatgaaaaaggggcgtttacaggtgcatatcagtcgtcagcaggaaaattcgagcag
gcgcaaggcgggactattttgctggatgaaatctctgaaatgaatattttattacaggct
aaattgttgcgtgttttacaagaaaaagaagtggagcgcttgggcggcaaaaaaaccata
gcgcttgacgtgcgtgtattggcgaccaccaataaagacctaagaaccctggtgaacgag
ggtaagtttagagaggatctgttgtataggatcaatgtgttccccatcaatataccacca
ctaagagagcgaaaagcagatgttctggctttgtcgaaaacgatgattgcgcgacattat
aacggcgaccaatcgccaccaacactatcagctaacgccattaagctgcttgaaaagcat
gattggaaagggaatgttcgtgagttagaaaatgtcattcagcgggctttaattatggca
aatggctcaatgattactgagaacgatttgatttttgaatcgacgccatcagcaataagc
acagagccgcttgagaggtctgagacggcagaaaatgagttgagtgcaggtgttagagcg
gtcgaagataagcttattctcgatacgctagttagtgctaatggcagtcgtaaaaatact
gccgaacggcttggtatcagtgcaagaacactgcgctacaaaattgcacggatgcgtgag
gcgggcgttgaaatccctgcatga
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